RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 COLGALT1Q8NBJ5 622 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 SPPL3Q8TCT6 385 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 TATDN2Q93075 761 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 MRFAP1L1Q96HT8 127 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 IGSF21Q96ID5 467 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 HPDLQ96IR7 371 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 FAM84AQ96KN4 292 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 SUSD3Q96L08 255 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 FAM81BQ96LP2 452 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 ZNF558Q96NG5 402 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 NAA15Q9BXJ9 866 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 BCO2Q9BYV7 579 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 XPO4Q9C0E2 1151 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 CYP3A43Q9HB55 503 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 APOBEC3GQ9HC16 384 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 SPG21Q9NZD8 308 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 IFNKQ9P0W0 207 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 HCSTQ9UBK5 93 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 MSRAQ9UJ68 235 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 ADAM28Q9UKQ2 775 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 CNTN6Q9UQ52 1028 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 COLQQ9Y215 455 aaPredicted RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 LZTS1Q9Y250 596 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 YBX2Q9Y2T7 364 aaKnown RBP6.31□□□□□ -1.4
ABCF1-207ENST00000542772 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 PCDHB12Q9Y5F1 795 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 IRAK3Q9Y616 596 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 PDE4DIPQ5VU43 2346 aa6.31□□□□□ -1.4
ABCF1-207ENST00000542772 CEP290O15078 2479 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 NT5C1B-RDH14C9J2C7 533 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 H3BNC9 293 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 SYN3O14994 580 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CBFA2T2O43439 604 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TRAPPC3O43617 180 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ARHGEF15O94989 841 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 OAZ2O95190 189 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KIF4AO95239 1232 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 C1RP00736 705 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ITGB1P05556 798 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CA3P07451 260 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KRT19P08727 400 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TYMPP19971 482 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 PPM1AP35813 382 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 BRCC3P46736 316 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 MYL7Q01449 175 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 GCNT1Q02742 428 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KRT17Q04695 432 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 UBE3AQ05086 875 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ELAVL2Q12926 359 aaKnown RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ARID5BQ14865 1188 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 SYCP1Q15431 976 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 SOWAHAQ2M3V2 549 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 WDR72Q3MJ13 1102 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ZNF667Q5HYK9 610 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 FKBP15Q5T1M5 1219 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KLHDC7AQ5VTJ3 777 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KIAA0319Q5VV43 1072 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 FUT10Q6P4F1 479 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TRIM65Q6PJ69 517 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ENOSF1Q7L5Y1 443 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TAS1R1Q7RTX1 841 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM173Q86WV6 379 aaPredicted RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CRYBG2Q8N1P7 616 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TTC39CQ8N584 583 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TOP6BLQ8N6T0 577 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 UBR7Q8N806 425 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KLHL23Q8NBE8 558 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 BCL7CQ8WUZ0 217 aaPredicted RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 RABGGTAQ92696 567 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 SENP8Q96LD8 212 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 ZNF560Q96MR9 790 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TGS1Q96RS0 853 aaKnown RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CRACR2AQ9BSW2 395 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 PI4K2AQ9BTU6 479 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 NUP58Q9BVL2 599 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 VN1R3Q9BXE9 311 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 OXCT2Q9BYC2 517 aaPredicted RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 GPR62Q9BZJ7 368 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CEP72Q9P209 647 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CACNG4Q9UBN1 327 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 APEX2Q9UBZ4 518 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 PCDHB8Q9UN66 801 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 R3HCC1Q9Y3T6 440 aaKnown RBP6.3□□□□□ -1.4
ABCF1-207ENST00000542772 CHD9Q3L8U1 2897 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 NLRC5Q86WI3 1866 aa6.3□□□□□ -1.4
ABCF1-207ENST00000542772 KIAA1671Q9BY89 1806 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ITIH6Q6UXX5 1313 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 TMEM265A0A087WTH1 108 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 ARHGEF37A1IGU5 675 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 GOLGA6L3A6NEY3 463 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 F8W810 466 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 RNF225M0QZC1 329 aaPredicted RBP6.29□□□□□ -1.4
ABCF1-207ENST00000542772 CYB561D2O14569 222 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 HUS1O60921 280 aa6.29□□□□□ -1.4
ABCF1-207ENST00000542772 FGF18O76093 207 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms