RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 ADAM32Q8TC27 787 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 ZNF606Q8WXB4 792 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 PLCH1Q4KWH8 1693 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 RRN3P2A6NIE6 340 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 ACKR2O00590 384 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 TREHO43280 583 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CST3P01034 146 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-208ENST00000542570 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
TOP3A-208ENST00000542570 DNAJB2P25686 324 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 GGCXP38435 758 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 MMP14P50281 582 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CCL23P55773 120 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 DCLK2Q8N568 766 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 C9orf72Q96LT7 481 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 STARD7Q9NQZ5 370 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 PARVAQ9NVD7 372 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 PLIN4Q96Q06 1357 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 A0A1W2PQJ5 194 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 RAD51CO43502 376 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CALB1P05937 261 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 ELF1P32519 619 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 GOLGA7BQ2TAP0 167 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC91Q7Z6B0 441 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 SCUBE3Q8IX30 993 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC13Q8IYE1 715 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CFAP36Q96G28 342 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 KATNAL1Q9BW62 490 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 DHX15O43143 795 aaKnown RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 RECQL4O94761 1208 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 RALAP11233 206 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 PSEN2P49810 448 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 EPHB4P54760 987 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ITIH3Q06033 890 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 MAP2K5Q13163 448 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 C12orf29Q8N999 325 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 MAIP1Q8WWC4 291 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SAYSD1Q9NPB0 183 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ATP11BQ9Y2G3 1177 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TOGARAM1Q9Y4F4 1720 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 DUOX1Q9NRD9 1551 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 EBAG9O00559 213 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 GTF2BQ00403 316 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 CDR2Q01850 454 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ATP13A4Q4VNC1 1196 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ENOSF1Q7L5Y1 443 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ANKMY2Q8IV38 441 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 RHOT1Q8IXI2 618 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 RYBPQ8N488 228 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ARFGAP2Q8N6H7 521 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 USP33Q8TEY7 942 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TSNARE1Q96NA8 513 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SPON2Q9BUD6 331 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 VTA1Q9NP79 307 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 A0A0G2JLL6 359 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 GRID2IPA4D2P6 1211 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 MAPTP10636 758 aaKnown RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 AKR1A1P14550 325 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 NDST1P52848 882 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TMED2Q15363 201 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 GLB1LQ6UWU2 654 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 PRRT2Q7Z6L0 340 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 PDCD6IPQ8WUM4 868 aaKnown RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SMYD3Q9H7B4 428 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 PLAAQ9Y263 795 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 UMODL1Q5DID0 1318 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TLR2O60603 784 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 KRT14P02533 472 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SMIM10L2AP0DMW4 78 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SMIM10L2BP0DMW5 78 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SMPD1P17405 629 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 ARF4P18085 180 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 EIF4BP23588 611 aaKnown RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TSPY1Q01534 308 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 SP3Q02447 781 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 NNTQ13423 1086 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TDRD10Q5VZ19 366 aaKnown RBP10.73□□□□□ -0.69
TOP3A-208ENST00000542570 GDAP1Q8TB36 358 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 BCAS4Q8TDM0 211 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 BAP1Q92560 729 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 P3H4Q92791 437 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 FAM81BQ96LP2 452 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 TRIM7Q9C029 511 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 CDT1Q9H211 546 aa10.73□□□□□ -0.69
TOP3A-208ENST00000542570 MGAT5BQ3V5L5 792 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 HHATQ5VTY9 493 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 FAM131BQ86XD5 332 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 TMEM192Q8IY95 271 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 C10orf67Q8IYJ2 551 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 GRK7Q8WTQ7 553 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 KRT35Q92764 455 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 CGRRF1Q99675 332 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
TOP3A-208ENST00000542570 SENP6Q9GZR1 1112 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
TOP3A-208ENST00000542570 SAE1Q9UBE0 346 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms