RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PTENP60484 403 aa17■□□□□ 0.31
VARS2-212ENST00000542001 CUL2Q13617 745 aa17■□□□□ 0.31
VARS2-212ENST00000542001 LRIG3Q6UXM1 1119 aa17■□□□□ 0.31
VARS2-212ENST00000542001 CERKQ8TCT0 537 aa17■□□□□ 0.31
VARS2-212ENST00000542001 SEPT1Q8WYJ6 367 aa17■□□□□ 0.31
VARS2-212ENST00000542001 RAB3IPQ96QF0 476 aaPredicted RBP17■□□□□ 0.31
VARS2-212ENST00000542001 VPS11Q9H270 941 aa17■□□□□ 0.31
VARS2-212ENST00000542001 AGPSO00116 658 aa17■□□□□ 0.31
VARS2-212ENST00000542001 MAPK13O15264 365 aa17■□□□□ 0.31
VARS2-212ENST00000542001 ETS1P14921 441 aa17■□□□□ 0.31
VARS2-212ENST00000542001 SDC4P31431 198 aa17■□□□□ 0.31
VARS2-212ENST00000542001 HNRNPH3P31942 346 aaKnown RBP17■□□□□ 0.31
VARS2-212ENST00000542001 MAP7D1Q3KQU3 841 aa17■□□□□ 0.31
VARS2-212ENST00000542001 SPATA18Q8TC71 538 aa17■□□□□ 0.31
VARS2-212ENST00000542001 PDGFDQ9GZP0 370 aaPredicted RBP17■□□□□ 0.31
VARS2-212ENST00000542001 GDF3Q9NR23 364 aa17■□□□□ 0.31
VARS2-212ENST00000542001 CFLARO15519 480 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SERPINB6P35237 376 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 AARSP49588 968 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS2-212ENST00000542001 ARPP19P56211 112 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 CYP24A1Q07973 514 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 LY6KQ17RY6 165 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SHCBP1LQ9BZQ2 653 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 A8MXQ7 604 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 GJB1P08034 283 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 ITIH2P19823 946 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 ITGB3BPQ13352 177 aaPredicted RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 TRPM8Q7Z2W7 1104 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 CCDC60Q8IWA6 550 aaPredicted RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 FEZF2Q8TBJ5 459 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 PPP4R1Q8TF05 950 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 DEPDC1BQ8WUY9 529 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 MKL1Q969V6 931 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 CCDC124Q96CT7 223 aaKnown RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 CCDC97Q96F63 343 aaPredicted RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 DDX20Q9UHI6 824 aaKnown RBP16.99■□□□□ 0.31
VARS2-212ENST00000542001 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 ITGB3P05106 788 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SNHG28P0DPA3 235 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 EPHB1P54762 984 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 VAV3Q9UKW4 847 aa16.99■□□□□ 0.31
VARS2-212ENST00000542001 SETD1AO15047 1707 aaKnown RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 FRMPD4Q14CM0 1322 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 IREB2P48200 963 aaKnown RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 SNX16P57768 344 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 EFCAB12Q6NXP0 572 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 DLK2Q6UY11 383 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 ENOSF1Q7L5Y1 443 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 SIK2Q9H0K1 926 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 IFT122Q9HBG6 1241 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 UBN1Q9NPG3 1134 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 EXTL3O43909 919 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 BACE1P56817 501 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 RWDD4Q6NW29 188 aaKnown RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 NACA2Q9H009 215 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 KLK14Q9P0G3 267 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 ZFP69BQ9UJL9 534 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 USP15Q9Y4E8 981 aaPredicted RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 RIPK3Q9Y572 518 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 LPXNO60711 386 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 RARBP10826 455 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 ZCWPW2Q504Y3 356 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 SEMA4DQ92854 862 aa16.98■□□□□ 0.31
VARS2-212ENST00000542001 WRAP73Q9P2S5 460 aaPredicted RBP16.98■□□□□ 0.31
VARS2-212ENST00000542001 CCT8L1PA6NM43 557 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 GYG2O15488 501 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 DIAPH2O60879 1101 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 OATP04181 439 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 RRP1BQ14684 758 aaKnown RBP16.97■□□□□ 0.31
VARS2-212ENST00000542001 AGBL2Q5U5Z8 902 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 TWF2Q6IBS0 349 aaKnown RBP16.97■□□□□ 0.31
VARS2-212ENST00000542001 PRELID2Q8N945 189 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 SLC24A3Q9HC58 644 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
VARS2-212ENST00000542001 KDSRQ06136 332 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 TAF12Q16514 161 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 IL31Q6EBC2 164 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 KIF1AQ12756 1690 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 F8VP50 259 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 AP1B1Q10567 949 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 SIX6OS1Q8N1H7 587 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 PCDHB18PQ96TA0 734 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 COL20A1Q9P218 1284 aa16.97■□□□□ 0.31
VARS2-212ENST00000542001 M0QZ92 97 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
VARS2-212ENST00000542001 SEPT6Q14141 434 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 GJC2Q5T442 439 aaPredicted RBP16.96■□□□□ 0.31
VARS2-212ENST00000542001 TTC1Q99614 292 aa16.96■□□□□ 0.31
VARS2-212ENST00000542001 TRIM55Q9BYV6 548 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms