RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 USP45Q70EL2 814 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 CFAP52Q8N1V2 620 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 NLGN4YQ8NFZ3 816 aaPredicted RBP4.39□□□□□ -1.71
CUL3-214ENST00000541548 SSH3Q8TE77 659 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 HOOK2Q96ED9 719 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 BBC3Q96PG8 261 aaPredicted RBP4.39□□□□□ -1.71
CUL3-214ENST00000541548 MED15Q96RN5 788 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 R3HDMLQ9H3Y0 253 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 DDX56Q9NY93 547 aaKnown RBP4.39□□□□□ -1.71
CUL3-214ENST00000541548 AGAP1Q9UPQ3 857 aa4.39□□□□□ -1.71
CUL3-214ENST00000541548 PROM1O43490 865 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 C1QL1O75973 258 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 RHOBTB3O94955 611 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 KCNA2P16389 499 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 MAP2K6P52564 334 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 HK3P52790 923 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 BLOC1S1P78537 153 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 SP5Q6BEB4 398 aaPredicted RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 Q6ZNX1 250 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 TTC7BQ86TV6 843 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 RAVER1Q8IY67 606 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 SLC44A3Q8N4M1 653 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 NSUN7Q8NE18 718 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 REXO4Q9GZR2 422 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 CYP4F11Q9HBI6 524 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 GPR35Q9HC97 309 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 SIDT1Q9NXL6 827 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 KCTD5Q9NXV2 234 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 CDYLQ9Y232 598 aa4.38□□□□□ -1.71
CUL3-214ENST00000541548 THRAP3Q9Y2W1 955 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 LUC7L2Q9Y383 392 aaKnown RBP4.38□□□□□ -1.71
CUL3-214ENST00000541548 PRAMEF33A0A0G2JMD5 474 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 WDR27A2RRH5 827 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PRAMEF10O60809 474 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PDGFRBP09619 1106 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 ELFN1P0C7U0 828 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 BMP5P22003 454 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 GATA3P23771 443 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PTH2RP49190 550 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 HNRNPMP52272 730 aaKnown RBP eCLIP4.37□□□□□ -1.715e-8■■■■□ 24.3
CUL3-214ENST00000541548 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
CUL3-214ENST00000541548 SIM1P81133 766 aaPredicted RBP4.37□□□□□ -1.71
CUL3-214ENST00000541548 CREMQ03060 361 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 MPP3Q13368 585 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 KIF22Q14807 665 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 ZNF169Q14929 603 aaPredicted RBP4.37□□□□□ -1.71
CUL3-214ENST00000541548 TTF1Q15361 905 aaPredicted RBP4.37□□□□□ -1.71
CUL3-214ENST00000541548 ATAT1Q5SQI0 421 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 ZBTB46Q86UZ6 589 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 ZNF575Q86XF7 245 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PPP1R3BQ86XI6 285 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PDSS2Q86YH6 399 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 ADGRG5Q8IZF4 528 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 LCORLQ8N3X6 602 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 SIMC1Q8NDZ2 872 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 PLBD2Q8NHP8 589 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 HSPBAP1Q96EW2 488 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 NUP88Q99567 741 aaPredicted RBP4.37□□□□□ -1.71
CUL3-214ENST00000541548 PACSIN1Q9BY11 444 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 RNF181Q9P0P0 153 aa4.37□□□□□ -1.71
CUL3-214ENST00000541548 VWC2LB2RUY7 222 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 KIAA0355O15063 1070 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 AKAP10O43572 662 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 ALDH1L1O75891 902 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 SRGNP10124 158 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 FBLP22087 321 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 AVPR1BP47901 424 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 ANXA11P50995 505 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 USP14P54578 494 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 BOP1Q14137 746 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 SF3B3Q15393 1217 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 PPP4R3AQ6IN85 833 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 VWA1Q6PCB0 445 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 B3GNT9Q6UX72 402 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 GADL1Q6ZQY3 521 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 MIER2Q8N344 545 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 CELF5Q8N6W0 485 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 LPIN2Q92539 896 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 HPS3Q969F9 1004 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 RGMAQ96B86 450 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 MRPL46Q9H2W6 279 aaKnown RBP4.36□□□□□ -1.71
CUL3-214ENST00000541548 RLIMQ9NVW2 624 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 PCDHA3Q9Y5H8 950 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 NOX1Q9Y5S8 564 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 PCSK5Q92824 1860 aa4.36□□□□□ -1.71
CUL3-214ENST00000541548 SNUPNO95149 360 aaKnown RBP4.35□□□□□ -1.71
CUL3-214ENST00000541548 ANXA1P04083 346 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 ALDH2P05091 517 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 GJB1P08034 283 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 TYRP14679 529 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 AKAP5P24588 427 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 PCSK6P29122 969 aa4.35□□□□□ -1.71
CUL3-214ENST00000541548 PIN1Q13526 163 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms