RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 AARSP49588 968 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 ARPP19P56211 112 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 UBE2HP62256 183 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 YWHAHQ04917 246 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 ITIH3Q06033 890 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CYP24A1Q07973 514 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 DUOXA2Q1HG44 320 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CTXN3Q4LDR2 81 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 LILRA6Q6PI73 481 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 USP37Q86T82 979 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 C12orf56Q8IXR9 622 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CSGALNACT2Q8N6G5 542 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 KREMEN2Q8NCW0 462 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 FEZF2Q8TBJ5 459 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 SUSD6Q92537 303 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 SMARCE1Q969G3 411 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CCDC127Q96BQ5 260 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 ANKRD36BP1Q96IX9 119 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 IPO9Q96P70 1041 aaKnown RBP9.97□□□□□ -0.81
SNHG1-215ENST00000540904 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 FNBP1Q96RU3 617 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 PLEKHA4Q9H4M7 779 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 TSHZ2Q9NRE2 1034 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 AGAP1Q9UPQ3 857 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 PCDHA5Q9Y5H7 936 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 PTPRJQ12913 1337 aa9.97□□□□□ -0.81
SNHG1-215ENST00000540904 CITO14578 2027 aa9.96□□□□□ -0.81
SNHG1-215ENST00000540904 CCDC195A0A1B0GUA6 201 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 M0QZQ0 153 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 PDXKO00764 312 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 CYB561D2O14569 222 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 RFPL2O75678 378 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 TNNC2P02585 160 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ODC1P11926 461 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 TNNI1P19237 187 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SP100P23497 879 aaPredicted RBP9.96□□□□□ -0.82
SNHG1-215ENST00000540904 TAF6P49848 677 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ZP2Q05996 745 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 RAB33AQ14088 237 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 MRPL58Q14197 206 aaKnown RBP9.96□□□□□ -0.82
SNHG1-215ENST00000540904 PSMD6Q15008 389 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SURF1Q15526 300 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SV2CQ496J9 727 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ATAT1Q5SQI0 421 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 LIN9Q5TKA1 542 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 CEP135Q66GS9 1140 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SCARA3Q6AZY7 606 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ISM2Q6H9L7 571 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF280DQ6N043 979 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 WDR49Q8IV35 697 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SLC9A9Q8IVB4 645 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ADHFE1Q8IWW8 467 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
SNHG1-215ENST00000540904 OR5B17Q8NGF7 314 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 RPGRIP1Q96KN7 1286 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 SENP8Q96LD8 212 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 POP1Q99575 1024 aaKnown RBP9.96□□□□□ -0.82
SNHG1-215ENST00000540904 INTS13Q9NVM9 706 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 DMAC2Q9NW81 257 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 PRKAG3Q9UGI9 489 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 FBXL5Q9UKA1 691 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 FRMD4BQ9Y2L6 1034 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 R3HCC1Q9Y3T6 440 aaKnown RBP9.96□□□□□ -0.82
SNHG1-215ENST00000540904 BRWD1Q9NSI6 2320 aa9.96□□□□□ -0.82
SNHG1-215ENST00000540904 KPNA7A9QM74 516 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 TNFRSF10AO00220 468 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 TBC1D4O60343 1298 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 OAZ2O95190 189 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 C1RP00736 705 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 C8AP07357 584 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 PAX3P23760 479 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 NR2F2P24468 414 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 PNPLA4P41247 253 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 PRCPP42785 496 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 MTHFRP42898 656 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 CASP4P49662 377 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 RBP5P82980 135 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 ROR1Q01973 937 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 BFSP1Q12934 665 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF658Q5TYW1 1059 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-215ENST00000540904 OVOS1Q6IE37 1185 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 SLC8B1Q6J4K2 584 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 GPR149Q86SP6 731 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-215ENST00000540904 GJD3Q8N144 294 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 ZNF461Q8TAF7 563 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 SPATA20Q8TB22 786 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 SLC7A14Q8TBB6 771 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 MFSD14AQ96MC6 490 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 NECTIN4Q96NY8 510 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 CGRRF1Q99675 332 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 PHF7Q9BWX1 381 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-215ENST00000540904 POMKQ9H5K3 350 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 PIDD1Q9HB75 910 aa9.95□□□□□ -0.82
SNHG1-215ENST00000540904 CD320Q9NPF0 282 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms