RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 FAM189A1O60320 539 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 OAZ2O95190 189 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 MYL4P12829 197 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 VIPR2P41587 438 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 MAGEA9P43362 315 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 AARSP49588 968 aaKnown RBP eCLIP17.68■□□□□ 0.422e-6■■■□□ 17.5
TRIM65-203ENST00000540812 EPHA5P54756 1037 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 YWHAHQ04917 246 aaPredicted RBP17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ARL6IP4Q66PJ3 421 aaKnown RBP17.68■□□□□ 0.42
TRIM65-203ENST00000540812 IQCEQ6IPM2 695 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 VITQ6UXI7 678 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ZNF852Q6ZMS4 543 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ERMP1Q7Z2K6 904 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 HAUS6Q7Z4H7 955 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ZNF687Q8N1G0 1237 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 RUBCNQ92622 972 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 DNASE1L2Q92874 299 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 ZNF512Q96ME7 567 aaPredicted RBP17.68■□□□□ 0.42
TRIM65-203ENST00000540812 PGLYRP2Q96PD5 576 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 NELL2Q99435 816 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 REEP2Q9BRK0 252 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 BRD9Q9H8M2 597 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 LARSQ9P2J5 1176 aaKnown RBP17.68■□□□□ 0.42
TRIM65-203ENST00000540812 MAFFQ9ULX9 164 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 YIPF1Q9Y548 306 aa17.68■□□□□ 0.42
TRIM65-203ENST00000540812 PPEF2O14830 753 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 KINO60870 393 aaKnown RBP17.67■□□□□ 0.42
TRIM65-203ENST00000540812 CYP3A5P20815 502 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 GDI1P31150 447 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 LIG4P49917 911 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 PPP2R3AQ06190 1150 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 DHX8Q14562 1220 aaKnown RBP17.67■□□□□ 0.42
TRIM65-203ENST00000540812 TEAD2Q15562 447 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 TSSK4Q6SA08 328 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 SHKBP1Q8TBC3 707 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 SMARCD2Q92925 531 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 KCNN1Q92952 543 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 TRMT61BQ9BVS5 477 aaKnown RBP17.67■□□□□ 0.42
TRIM65-203ENST00000540812 ASAH2Q9NR71 780 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 BLOC1S4Q9NUP1 217 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 TBX20Q9UMR3 447 aa17.67■□□□□ 0.42
TRIM65-203ENST00000540812 UBQLN1Q9UMX0 589 aaKnown RBP17.67■□□□□ 0.42
TRIM65-203ENST00000540812 NDRG2Q9UN36 371 aaKnown RBP17.67■□□□□ 0.42
TRIM65-203ENST00000540812 H0YCG3 227 aa17.66■□□□□ 0.42
TRIM65-203ENST00000540812 RPS9P46781 194 aaKnown RBP17.66■□□□□ 0.42
TRIM65-203ENST00000540812 GRIN1Q05586 938 aa17.66■□□□□ 0.42
TRIM65-203ENST00000540812 MYCT1Q8N699 235 aa17.66■□□□□ 0.42
TRIM65-203ENST00000540812 ZSCAN18Q8TBC5 510 aaPredicted RBP17.66■□□□□ 0.42
TRIM65-203ENST00000540812 LRRC3Q9BY71 257 aa17.66■□□□□ 0.42
TRIM65-203ENST00000540812 DNAJC25Q9H1X3 360 aa17.66■□□□□ 0.42
TRIM65-203ENST00000540812 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
TRIM65-203ENST00000540812 ZNF334Q9HCZ1 680 aaPredicted RBP17.66■□□□□ 0.42
TRIM65-203ENST00000540812 COL4A2P08572 1712 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 K7ENM7 598 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 HNRNPDLO14979 420 aaKnown RBP17.65■□□□□ 0.42
TRIM65-203ENST00000540812 SPTLC1O15269 473 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 OGTO15294 1046 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 NCAM2O15394 837 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 PIGRP01833 764 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 PSMC3P17980 439 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 ZNF131P52739 623 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 DUSP4Q13115 394 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 MTAPQ13126 283 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 MCM6Q14566 821 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 DSTYKQ6XUX3 929 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 USP37Q86T82 979 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 TMC8Q8IU68 726 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 LEMD2Q8NC56 503 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 ZBTB44Q8NCP5 570 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 NELL1Q92832 810 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 RSPRY1Q96DX4 576 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 AK8Q96MA6 479 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 TMEM209Q96SK2 561 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 RPF1Q9H9Y2 349 aaKnown RBP17.65■□□□□ 0.42
TRIM65-203ENST00000540812 PARVGQ9HBI0 331 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 PRMT8Q9NR22 394 aaPredicted RBP17.65■□□□□ 0.42
TRIM65-203ENST00000540812 ZSCAN32Q9NX65 697 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 ODF2LQ9ULJ1 636 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 MRPS17Q9Y2R5 130 aaKnown RBP17.65■□□□□ 0.42
TRIM65-203ENST00000540812 PCDHGA2Q9Y5H1 932 aa17.65■□□□□ 0.42
TRIM65-203ENST00000540812 A0A0B4J269 797 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 A0A1W2PRU2 124 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 OR6C75A6NL08 312 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 HEPACAM2A8MVW5 462 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 FAM13AO94988 1023 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 ADRB2P07550 413 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 UBA7P41226 1012 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
TRIM65-203ENST00000540812 SPATA1Q5VX52 437 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 OVOS1Q6IE37 1185 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 JADE1Q6IE81 842 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 TTC9BQ8N6N2 239 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 ATRIPQ8WXE1 791 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 RAD54LQ92698 747 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 IRF7Q92985 503 aa17.64■□□□□ 0.41
TRIM65-203ENST00000540812 FAM212AQ96EL1 285 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms