RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CAND2O75155 1236 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 RTN2O75298 545 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 RPS6KA5O75582 802 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 ZNF132P52740 706 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 RBP5P82980 135 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 ZNF667Q5HYK9 610 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 UBXN11Q5T124 520 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 PAPD7Q5XG87 772 aaKnown RBP18.06■□□□□ 0.48
COPS3-212ENST00000539941 ALKAL1Q6UXT8 129 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 ARRDC4Q8NCT1 418 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 KIF12Q96FN5 646 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
COPS3-212ENST00000539941 CNTN3Q9P232 1028 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CDC23Q9UJX2 597 aa18.06■□□□□ 0.48
COPS3-212ENST00000539941 CHRNA1P02708 482 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 ITGB3P05106 788 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 MMEP08473 750 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 KRT19P08727 400 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 P4HA1P13674 534 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 ASPAP45381 313 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 NAP1L1P55209 391 aaKnown RBP18.05■□□□□ 0.48
COPS3-212ENST00000539941 AMPD2Q01433 879 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 TMEM270Q6UE05 265 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 RBBP8NLQ8NC74 664 aaPredicted RBP18.05■□□□□ 0.48
COPS3-212ENST00000539941 RFFLQ8WZ73 363 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 WNT8BQ93098 351 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 SEZ6LQ9BYH1 1024 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 ARGLU1Q9NWB6 273 aaPredicted RBP18.05■□□□□ 0.48
COPS3-212ENST00000539941 DPP3Q9NY33 737 aa18.05■□□□□ 0.48
COPS3-212ENST00000539941 MKI67P46013 3256 aaKnown RBP18.04■□□□□ 0.48
COPS3-212ENST00000539941 GPR182O15218 404 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 RECQL4O94761 1208 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 TCEAL1Q15170 157 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 XKR4Q5GH76 650 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 PPP1R2P3Q6NXS1 205 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 TRIM72Q6ZMU5 477 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 PALB2Q86YC2 1186 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 SH3TC2Q8TF17 1288 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 PCDHB18PQ96TA0 734 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 BCO2Q9BYV7 579 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 NXF3Q9H4D5 531 aaKnown RBP18.04■□□□□ 0.48
COPS3-212ENST00000539941 CYP3A43Q9HB55 503 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 MYH10P35580 1976 aa18.04■□□□□ 0.48
COPS3-212ENST00000539941 PDCD11Q14690 1871 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 ERICH4A6NGS2 130 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 XPOTO43592 962 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 BUB1O43683 1085 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 ZBTB6Q15916 424 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 FAM26DQ5JW98 314 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 SCARA3Q6AZY7 606 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 TTC39CQ8N584 583 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 GOLGA6L1Q8N7Z2 621 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 BEST2Q8NFU1 509 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 ACP6Q9NPH0 428 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 CISHQ9NSE2 258 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 TAS2R14Q9NYV8 317 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 UBQLN1Q9UMX0 589 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 ST3GAL5Q9UNP4 418 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 SQORQ9Y6N5 450 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 KIAA0100Q14667 2235 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 TMCO5BA8MYB1 307 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 FTLP02792 175 aaPredicted RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 ATP1A1P05023 1023 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 CTSHP09668 335 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 KCNE1P15382 129 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 PRLRP16471 622 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 GNA15P30679 374 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 POLR2BP30876 1174 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 THPOP40225 353 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 WHAMMP3Q1A5X7 153 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 CLEC16AQ2KHT3 1053 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 TWF2Q6IBS0 349 aaKnown RBP18.03■□□□□ 0.48
COPS3-212ENST00000539941 RHOT2Q8IXI1 618 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 HACE1Q8IYU2 909 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 SLC43A3Q8NBI5 491 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 HPDLQ96IR7 371 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.48
COPS3-212ENST00000539941 IPPQ9Y573 584 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 SAR1BQ9Y6B6 198 aa18.03■□□□□ 0.48
COPS3-212ENST00000539941 TRIP11Q15643 1979 aa18.02■□□□□ 0.48
COPS3-212ENST00000539941 CD4P01730 458 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 HADHBP55084 474 aaKnown RBP18.02■□□□□ 0.47
COPS3-212ENST00000539941 MYO1EQ12965 1108 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 TRIM71Q2Q1W2 868 aaKnown RBP18.02■□□□□ 0.47
COPS3-212ENST00000539941 WDR72Q3MJ13 1102 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 FBXO38Q6PIJ6 1188 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 USP38Q8NB14 1042 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 SMG8Q8ND04 991 aaKnown RBP18.02■□□□□ 0.47
COPS3-212ENST00000539941 AGAP1Q9UPQ3 857 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 PHF24Q9UPV7 400 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 HES2Q9Y543 173 aa18.02■□□□□ 0.47
COPS3-212ENST00000539941 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.02■□□□□ 0.47
COPS3-212ENST00000539941 A0A1W2PQ45 241 aaPredicted RBP18.01■□□□□ 0.47
COPS3-212ENST00000539941 A0A1W2PQY0 241 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 PALMO75781 387 aa18.01■□□□□ 0.47
COPS3-212ENST00000539941 EN2P19622 333 aaPredicted RBP18.01■□□□□ 0.47
COPS3-212ENST00000539941 NOP2P46087 812 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms