RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CEBPZQ03701 1054 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 TWF1Q12792 350 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 PKP1Q13835 747 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 STK38Q15208 465 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 DCAF4L1Q3SXM0 396 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 HYIQ5T013 277 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ATL3Q6DD88 541 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 SLC8B1Q6J4K2 584 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 FAM3CQ92520 227 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ZFYVE19Q96K21 471 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 TRMT61BQ9BVS5 477 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 TARS2Q9BW92 718 aaKnown RBP16.31■□□□□ 0.2
USB1-203ENST00000539737 BHMT2Q9H2M3 363 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 ZFP14Q9HCL3 533 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 GDE1Q9NZC3 331 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 TUBGCP4Q9UGJ1 667 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 GMEB2Q9UKD1 530 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 DNM3Q9UQ16 869 aa16.31■□□□□ 0.2
USB1-203ENST00000539737 RALGAPA1Q6GYQ0 2036 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 SLC38A8A6NNN8 435 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 SOAT2O75908 522 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 YEATS4O95619 227 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 CDC25AP30304 524 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 ELF1P32519 619 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 PEX3P56589 373 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 ZNF568Q3ZCX4 644 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 CTXN3Q4LDR2 81 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 PPM1JQ5JR12 505 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 RNF19BQ6ZMZ0 732 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 MAP4K3Q8IVH8 894 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 DAW1Q8N136 415 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 ZNF461Q8TAF7 563 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 LRRC3BQ96PB8 259 aa16.3■□□□□ 0.2
USB1-203ENST00000539737 POLR3BQ9NW08 1133 aaPredicted RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 FBXO2Q9UK22 296 aaPredicted RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
USB1-203ENST00000539737 CITO14578 2027 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 FRYQ5TBA9 3013 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 CHRNB1P11230 501 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 TXLNAP40222 546 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 GUCY2FP51841 1108 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 EFNA5P52803 228 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
USB1-203ENST00000539737 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 ALKAL1Q6UXT8 129 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 TTC9BQ8N6N2 239 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 SHKBP1Q8TBC3 707 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 ZSCAN18Q8TBC5 510 aaPredicted RBP16.29■□□□□ 0.2
USB1-203ENST00000539737 DNASE1L2Q92874 299 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 ACO2Q99798 780 aaKnown RBP16.29■□□□□ 0.2
USB1-203ENST00000539737 ATP6V1DQ9Y5K8 247 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 ATG2BQ96BY7 2078 aa16.29■□□□□ 0.2
USB1-203ENST00000539737 PHLPP2Q6ZVD8 1323 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 SFI1A8K8P3 1242 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 HEPACAM2A8MVW5 462 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 E9PMD0 336 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 ARNTLO00327 626 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 ABLIM1O14639 778 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 SPTLC2O15270 562 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 NCAM2O15394 837 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 ATF2P15336 505 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 GRM5P41594 1212 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 MAGEA9P43362 315 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
USB1-203ENST00000539737 SIM2Q14190 667 aaPredicted RBP16.28■□□□□ 0.2
USB1-203ENST00000539737 KCNK18Q7Z418 384 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 TCEAL8Q8IYN2 117 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 SMARCD2Q92925 531 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 SECISBP2LQ93073 1101 aaKnown RBP16.28■□□□□ 0.2
USB1-203ENST00000539737 NELL2Q99435 816 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 RTKNQ9BST9 563 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 RUSC1Q9BVN2 902 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 SMOC1Q9H4F8 434 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 PTPRHQ9HD43 1115 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 AVENQ9NQS1 362 aaPredicted RBP16.28■□□□□ 0.2
USB1-203ENST00000539737 RXFP3Q9NSD7 469 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
USB1-203ENST00000539737 MRPS17Q9Y2R5 130 aaKnown RBP16.28■□□□□ 0.2
USB1-203ENST00000539737 CEP295Q9C0D2 2601 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 A0A1W2PRU2 124 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 K7ERI5 159 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 PPP6R2O75170 966 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 ADRB1P08588 477 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 PSMC3P17980 439 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 MCM4P33991 863 aa16.27■□□□□ 0.2
USB1-203ENST00000539737 ANP32AP39687 249 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms