RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 USP17L17D6RBQ6 530 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 USP17L19D6RCP7 530 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 USP17L20D6RJB6 530 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 TGFB1I1O43294 461 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 KITP10721 976 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 RARBP10826 455 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 RPL13P26373 211 aaKnown RBP12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 ARL4CP56559 192 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 COG7P83436 770 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 USP17L24Q0WX57 530 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 USP17L6PQ6QN14 398 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 TRIM67Q6ZTA4 783 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 SCUBE1Q8IWY4 988 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 STKLD1Q8NE28 680 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 OR6Y1Q8NGX8 325 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 CD101Q93033 1021 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 TTC17Q96AE7 1141 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 MIS12Q9H081 205 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 BHMT2Q9H2M3 363 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 TYW1Q9NV66 732 aaKnown RBP12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC7A8Q9UHI5 535 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 PCDHGB4Q9UN71 923 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 PCDHGB5Q9Y5G0 923 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 FRMPD4Q14CM0 1322 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 PDXKO00764 312 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 GGPS1O95749 300 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC16A2P36021 539 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 RASA2Q15283 850 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 CATSPER3Q86XQ3 398 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 TSSK1BQ9BXA7 367 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 A0A1B0GUL6 1792 aa12.89□□□□□ -0.35
PRKCQ-203ENST00000539722 ARHGAP42A6NI28 874 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PEX2P28328 305 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PCSK6P29122 969 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 AP2B1P63010 937 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 SFSWAPQ12872 951 aaKnown RBP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 EPC2Q52LR7 807 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 CEP95Q96GE4 821 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 GRIP2Q9C0E4 1043 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ARHGEF4Q9NR80 690 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PPARGC1AQ9UBK2 798 aaKnown RBP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ACTL7BQ9Y614 415 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 E5RJQ4 531 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 TCEA3O75764 348 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 CIB2O75838 187 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 DLG4P78352 724 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 MYL7Q01449 175 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 MMEL1Q495T6 779 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ULK2Q8IYT8 1036 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 MTBPQ96DY7 904 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 EYA3Q99504 573 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 OSBPL8Q9BZF1 889 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 SHCBP1LQ9BZQ2 653 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 KCNK13Q9HB14 408 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 MYH11P35749 1972 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PRPF4O43172 522 aaKnown RBP eCLIP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 TYROBPO43914 113 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 RALAP11233 206 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 BGNP21810 368 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 EPHB1P54762 984 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 ASPHQ12797 758 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PDIA2Q13087 525 aaKnown RBP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 PTK6Q13882 451 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 SH2D4BQ5SQS7 431 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 CCDC110Q8TBZ0 833 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC26A7Q8TE54 656 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 SIKE1Q9BRV8 207 aa12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
PRKCQ-203ENST00000539722 COL4A1P02462 1669 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 ZBTB39O15060 712 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 CCDC166P0CW27 439 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 CDK4P11802 303 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 CRABP2P29373 138 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 CDK16Q00536 496 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 ZFYVE27Q5T4F4 411 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 KAZNQ674X7 775 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 LRRC8BQ6P9F7 803 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 RNF111Q6ZNA4 994 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 SLC47A2Q86VL8 602 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 GCNAQ96QF7 691 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 DCLK3Q9C098 648 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 PCIF1Q9H4Z3 704 aa12.87□□□□□ -0.35
PRKCQ-203ENST00000539722 USP29Q9HBJ7 922 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms