RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ISCUQ9H1K1 167 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 VCPKMTQ9H867 229 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 TRIM33Q9UPN9 1127 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 PDGFRAP16234 1089 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 AMPD2Q01433 879 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 MORF4L2Q15014 288 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 LRRC31Q6UY01 552 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 SLC26A7Q8TE54 656 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 DNAJC7Q99615 494 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 OSBPL1AQ9BXW6 950 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 NPHS2Q9NP85 383 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 H3BRJ5 948 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 EIF3DO15371 548 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNB1-206ENST00000539338 HLA-DRAP01903 254 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 ATXN8OSP0DMR3 200 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 SLC10A5Q5PT55 438 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 ZBTB41Q5SVQ8 909 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 FRA10AC1Q70Z53 315 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 DAGLBQ8NCG7 672 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 AGBL1Q96MI9 1066 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 ACAP3Q96P50 834 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 MXRA8Q9BRK3 442 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 ERP44Q9BS26 406 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 CAPN6Q9Y6Q1 641 aa15.29■□□□□ 0.04
CACNB1-206ENST00000539338 PREX1Q8TCU6 1659 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 STMN1P16949 149 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 PLA2G4AP47712 749 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 AP2B1P63010 937 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 KDSRQ06136 332 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SDE2Q6IQ49 451 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 RUSC1Q9BVN2 902 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 OSBPL8Q9BZF1 889 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SARS2Q9NP81 518 aaKnown RBP15.28■□□□□ 0.04
CACNB1-206ENST00000539338 RSPH10B2B2RC85 870 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 ADCY3O60266 1144 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 UPP2O95045 317 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 RSPH10BP0C881 870 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 NNMTP40261 264 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 ALDH18A1P54886 795 aaKnown RBP15.28■□□□□ 0.04
CACNB1-206ENST00000539338 EMC2Q15006 297 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 PPP1R36Q96LQ0 422 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 KIFC3Q9BVG8 833 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 RAB6BQ9NRW1 208 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 NDE1Q9NXR1 346 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 HACD3Q9P035 362 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 ZFATQ9P243 1243 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SPATA31D1Q6ZQQ2 1576 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SNX2O60749 519 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 GRAP2O75791 330 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 CYP11B2P19099 503 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 ST3GAL1Q11201 340 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 AGBL2Q5U5Z8 902 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 TRAPPC11Q7Z392 1133 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 KDELC2Q7Z4H8 507 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 OR6P1Q8NGX9 317 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SYN2Q92777 582 aaPredicted RBP15.28■□□□□ 0.04
CACNB1-206ENST00000539338 NCLNQ969V3 563 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 TRIM15Q9C019 465 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 THAP2Q9H0W7 228 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 L3MBTL1Q9Y468 752 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SNX9Q9Y5X1 595 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 PRKCEQ02156 737 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 FASTKD1Q53R41 847 aaKnown RBP15.28■□□□□ 0.04
CACNB1-206ENST00000539338 TTC39CQ8N584 583 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
CACNB1-206ENST00000539338 USP15Q9Y4E8 981 aaPredicted RBP15.28■□□□□ 0.04
CACNB1-206ENST00000539338 MSH4O15457 936 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 ITGA8P53708 1063 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 ACTR2P61160 394 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 TMED1Q13445 227 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 ITPRIPL1Q6GPH6 555 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 ANGPTL8Q6UXH0 198 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 HNRNPLLQ8WVV9 542 aaKnown RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 KLF6Q99612 283 aaPredicted RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 FUT8Q9BYC5 575 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 XPO7Q9UIA9 1087 aaKnown RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 TSR3Q9UJK0 312 aaKnown RBP15.27■□□□□ 0.04
CACNB1-206ENST00000539338 SLC4A7Q9Y6M7 1214 aa15.27■□□□□ 0.04
CACNB1-206ENST00000539338 TMEM120BA0PK00 339 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 DFFAO00273 331 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 SLC26A4O43511 780 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 ENO1P06733 434 aaKnown RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 SLC29A2Q14542 456 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 PRAMEF18Q5VWM3 479 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 ADGRA1Q86SQ6 560 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CASKIN2Q8WXE0 1202 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 CYFIP2Q96F07 1278 aa15.27■□□□□ 0.03
CACNB1-206ENST00000539338 MKNK1Q9BUB5 465 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms