RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MCOLN2Q8IZK6 566 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 MCPH1Q8NEM0 835 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ATP6V0A1Q93050 837 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ATG4CQ96DT6 458 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ZNF333Q96JL9 665 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 CEP170P1Q96L14 293 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 CEP89Q96ST8 783 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 KIAA1586Q9HCI6 787 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 PDLIM7Q9NR12 457 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 TOPORSQ9NS56 1045 aaPredicted RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 H0YCG3 227 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 CLDN3O15551 220 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ASAP2O43150 1006 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 DGAT1O75907 488 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 STBD1O95210 358 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 SCP2P22307 547 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 GRK4P32298 578 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 IFI35P80217 286 aaPredicted RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 SGO2Q562F6 1265 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 WDR78Q5VTH9 848 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 TAOK1Q7L7X3 1001 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 TRMT1LQ7Z2T5 733 aaKnown RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 GTF3C2Q8WUA4 911 aaPredicted RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ATXN2LQ8WWM7 1075 aaKnown RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 DHX38Q92620 1227 aaKnown RBP15.49■□□□□ 0.07
CDCA3-207ENST00000538862 SELENOSQ9BQE4 189 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 OSBPL7Q9BZF2 842 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 KDM4CQ9H3R0 1056 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 ANAPC7Q9UJX3 599 aa15.49■□□□□ 0.07
CDCA3-207ENST00000538862 A0A0G2JMZ2 1700 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 DLATP10515 647 aaKnown RBP15.48■□□□□ 0.07
CDCA3-207ENST00000538862 GHRP10912 638 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 FGFR4P22455 802 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 DSG3P32926 999 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 CLDN10P78369 228 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 PPARDQ03181 441 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 PTP4A2Q12974 167 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 AUHQ13825 339 aaKnown RBP15.48■□□□□ 0.07
CDCA3-207ENST00000538862 SWT1Q5T5J6 900 aaKnown RBP15.48■□□□□ 0.07
CDCA3-207ENST00000538862 LBX2Q6XYB7 198 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 GRK7Q8WTQ7 553 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 C1orf112Q9NSG2 853 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 INTS9Q9NV88 658 aaKnown RBP15.48■□□□□ 0.07
CDCA3-207ENST00000538862 GABBR1Q9UBS5 961 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
CDCA3-207ENST00000538862 PCDHB2Q9Y5E7 798 aa15.48■□□□□ 0.07
CDCA3-207ENST00000538862 ARID2Q68CP9 1835 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 TNRC18O15417 2968 aaPredicted RBP15.47■□□□□ 0.07
CDCA3-207ENST00000538862 VWA5AO00534 786 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 HNRNPDLO14979 420 aaKnown RBP15.47■□□□□ 0.07
CDCA3-207ENST00000538862 ADCY3O60266 1144 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 ZNF862O60290 1169 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 PSAPP07602 524 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 NR3C2P08235 984 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CAV1Q03135 178 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 KRT17Q04695 432 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 MTFR1Q15390 333 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 ANKRD20A8PQ5CZ79 823 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 RHBDF2Q6PJF5 856 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 GPR142Q7Z601 462 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 EPS8L3Q8TE67 593 aaKnown RBP15.47■□□□□ 0.07
CDCA3-207ENST00000538862 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 HOXC10Q9NYD6 342 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 GJD2Q9UKL4 321 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 EXTL3O43909 919 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 RASSF9O75901 435 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CYP1A1P04798 512 aaPredicted RBP15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CYP2B6P20813 491 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 PTK6Q13882 451 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 BAATQ14032 418 aaPredicted RBP15.47■□□□□ 0.07
CDCA3-207ENST00000538862 WDR44Q5JSH3 913 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 PIGWQ7Z7B1 504 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 ANKS4BQ8N8V4 417 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CCDC197Q8NCU1 140 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 C1orf54Q8WWF1 131 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CCT6BQ92526 530 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 KCNN1Q92952 543 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 SNF8Q96H20 258 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 IFT74Q96LB3 600 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 CCDC114Q96M63 670 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 FAM213AQ9BRX8 229 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 ARHGAP28Q9P2N2 729 aa15.47■□□□□ 0.07
CDCA3-207ENST00000538862 NFASCO94856 1347 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 MROH7Q68CQ1 1323 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 ADGRA3Q8IWK6 1321 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 SMIM23A6NLE4 172 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 TP73O15350 636 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 KCNA2P16389 499 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 CENPCQ03188 943 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 ITIH4Q14624 930 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 PSMD6Q15008 389 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 ZNF516Q92618 1163 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 CDC42EP4Q9H3Q1 356 aaKnown RBP15.46■□□□□ 0.07
CDCA3-207ENST00000538862 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 AAASQ9NRG9 546 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 RNF146Q9NTX7 359 aa15.46■□□□□ 0.07
CDCA3-207ENST00000538862 KIAA1217Q5T5P2 1943 aa15.46■□□□□ 0.06
CDCA3-207ENST00000538862 DNM1LO00429 736 aa15.45■□□□□ 0.06
CDCA3-207ENST00000538862 GAS8O95995 478 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms