RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CCDC103Q8IW40 242 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 FAM162AQ96A26 154 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 CYFIP2Q96F07 1278 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 ARHGEF38Q9NXL2 777 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 RFX7Q2KHR2 1363 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 PP2D1A8MPX8 630 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF185O15231 689 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 CDH16O75309 829 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 FAM107AO95990 144 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 CDC27P30260 824 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 IRAK1P51617 712 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 CACNB3P54284 484 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-208ENST00000538570 LRRC74AQ0VAA2 488 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 GTF2H3Q13889 308 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 VEPH1Q14D04 833 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 SGSM3Q96HU1 749 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 MS4A14Q96JA4 679 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 KLHL11Q9NVR0 708 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 H2AFY2Q9P0M6 372 aaPredicted RBP10.42□□□□□ -0.74
COL4A6-208ENST00000538570 ANKARQ7Z5J8 1434 aa10.42□□□□□ -0.74
COL4A6-208ENST00000538570 IMPDH2P12268 514 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 VHLP40337 213 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF200P98182 395 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 GET4Q7L5D6 327 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KDELC2Q7Z4H8 507 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SLC35G2Q8TBE7 412 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ARHGEF26Q96DR7 871 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 RBM15Q96T37 977 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 QTRT2Q9H974 415 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 MPP6Q9NZW5 540 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 UVRAGQ9P2Y5 699 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZC3H7BQ9UGR2 993 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 MTO1Q9Y2Z2 717 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZHX2Q9Y6X8 837 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KDM5CP41229 1560 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 IGF2BP3O00425 579 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PDXKO00764 312 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 XPO1O14980 1071 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TSC22D2O75157 780 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 USP10Q14694 798 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 WDR24Q96S15 920 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SENP7Q9BQF6 1050 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TUFT1Q9NNX1 390 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SCN3BQ9NY72 215 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF521Q96K83 1311 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 FAM47DPA6NHR8 397 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 APRTP07741 180 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KIZQ2M2Z5 673 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 CYFIP1Q7L576 1253 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 HAUS6Q7Z4H7 955 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 INPP5DQ92835 1189 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 C18orf8Q96DM3 657 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PLEKHA8Q96JA3 519 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 MMP19Q99542 508 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PIDD1Q9HB75 910 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 C20orf96Q9NUD7 363 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KIAA0391O15091 583 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 EYA4O95677 639 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 EFNA5P52803 228 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ANGPT1Q15389 498 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KHDRBS2Q5VWX1 349 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 CENPPQ6IPU0 288 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SHC4Q6S5L8 630 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KRT73Q86Y46 540 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 FOPNLQ96NB1 174 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 THTPAQ9BU02 230 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 FAM129AQ9BZQ8 928 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TMEM245Q9H330 911 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TASP1Q9H6P5 420 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SYTL2Q9HCH5 934 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 NSMCE4AQ9NXX6 385 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 MAP3K20Q9NYL2 800 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SRP68Q9UHB9 627 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PREX2Q70Z35 1606 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 HECW2Q9P2P5 1572 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 FKBP9O95302 570 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ACADSP16219 412 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PLA2G4AP47712 749 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 FKBP9P1Q75LS8 142 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 PTPRN2Q92932 1015 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 AGAP3Q96P47 875 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TRIM51Q9BSJ1 452 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SYBUQ9NX95 663 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ZMYND8Q9ULU4 1186 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-208ENST00000538570 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KDM6BO15054 1643 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TDP2O95551 362 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 DLGAP3O95886 979 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 SLC18A3Q16572 532 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 ATAD3BQ5T9A4 648 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TNIP2Q8NFZ5 429 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 KRT35Q92764 455 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 CNBD2Q96M20 576 aa10.41□□□□□ -0.74
COL4A6-208ENST00000538570 TIPINQ9BVW5 301 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms