RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 REEP2Q9BRK0 252 aa13.05□□□□□ -0.32
TSPAN9-206ENST00000537971 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
TSPAN9-206ENST00000537971 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
TSPAN9-206ENST00000537971 CASTOR2A6NHX0 329 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 KRIT1O00522 736 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GLUD2P49448 558 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GTF2A1P52655 376 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 UBE3AQ05086 875 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 UBL4BQ8N7F7 174 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 POF1BQ8WVV4 589 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 RGS18Q9NS28 235 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GRIN2DO15399 1336 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GLUD1P00367 558 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 ZPBP2Q6X784 338 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 Q7L0L9 218 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 TAB3Q8N5C8 712 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 CASP10Q92851 521 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 LRRC45Q96CN5 670 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 LRRN2O75325 713 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GYS2P54840 703 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 KRT31Q15323 416 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 GDPD5Q8WTR4 605 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 CABS1Q96KC9 395 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 PARD6BQ9BYG5 372 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
TSPAN9-206ENST00000537971 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 RECQL4O94761 1208 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 PNPLA4P41247 253 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 CLCN6P51797 869 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 EXOC3L4Q17RC7 722 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 ARHGAP15Q53QZ3 475 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 CAPN12Q6ZSI9 719 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 EHD2Q9NZN4 543 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 AMFRQ9UKV5 643 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 IPPQ9Y573 584 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 TEX33O43247 280 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 ODC1P11926 461 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 KMT5BQ4FZB7 885 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 CTXN3Q4LDR2 81 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 LENG9Q96B70 501 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 CDX2Q99626 313 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 AGO3Q9H9G7 860 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 FGF18O76093 207 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 PAX3P23760 479 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 SV2CQ496J9 727 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 EPC2Q52LR7 807 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 GBP6Q6ZN66 633 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 RUSC1Q9BVN2 902 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
TSPAN9-206ENST00000537971 IGKV6D-21A0A0A0MT36 114 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 E7EVH7 732 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 FTCDO95954 541 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 CTNNA1P35221 906 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 TUSC3Q13454 348 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 ST7Q9NRC1 585 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 TBX20Q9UMR3 447 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 TNFSF13BQ9Y275 285 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 LOC285556D6RIA3 1793 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 GOLGA8JA6NMD2 632 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 ZBTB39O15060 712 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 BUB1BO60566 1050 aaPredicted RBP13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 TCP1P17987 556 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 MRPS5P82675 430 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 RBP5P82980 135 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 FKBP3Q00688 224 aaKnown RBP13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 DUOXA2Q1HG44 320 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 RESP18Q5W5W9 173 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 GPD1LQ8N335 351 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 DSEQ9UL01 958 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 SMCHD1A6NHR9 2005 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 KAT6AQ92794 2004 aa13.02□□□□□ -0.32
TSPAN9-206ENST00000537971 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 CLUL1Q15846 466 aa13.02□□□□□ -0.33
TSPAN9-206ENST00000537971 CC2D1AQ6P1N0 951 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms