RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZNF200P98182 395 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TP53BP2Q13625 1128 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 POLD3Q15054 466 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 C12orf60Q5U649 245 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 WDR93Q6P2C0 686 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 BNC2Q6ZN30 1099 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 UNC13DQ70J99 1090 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 C11orf74Q86VG3 221 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 METTL16Q86W50 562 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TC2NQ8N9U0 490 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TRNAU1APQ9NX07 287 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PCDHA1Q9Y5I3 950 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 SAC3D1A6NKF1 404 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TULP2O00295 520 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RNMTO43148 476 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LDHAP00338 332 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 IMPDH2P12268 514 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PAMP19021 973 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PTDSS1P48651 473 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CHRNA2Q15822 529 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EFHC1Q5JVL4 640 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LRRC49Q8IUZ0 686 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ZBTB8OSQ8IWT0 167 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 FUKQ8N0W3 1084 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ULK4Q96C45 1275 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RNPEPL1Q9HAU8 725 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RRN3Q9NYV6 651 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 AIPL1Q9NZN9 384 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TRPM1Q7Z4N2 1603 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CLASP2O75122 1294 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL12Q53G59 568 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LLGL2Q6P1M3 1020 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 HEXIM2Q96MH2 286 aaKnown RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 TMEM237Q96Q45 408 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 PHACTR1Q9C0D0 580 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MAD2L2Q9UI95 211 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 A0A087WXM4 84 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 LIN7AO14910 233 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MYBL2P10244 700 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 S100A1P23297 94 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 RFFLQ8WZ73 363 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 CEP95Q96GE4 821 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ROPN1BQ9BZX4 212 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 EPS8L2Q9H6S3 715 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 ROPN1Q9HAT0 212 aaPredicted RBP5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MYRFQ9Y2G1 1151 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MROH7-TTC4A0A0A0MT08 1334 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 MAST3O60307 1309 aa5.93□□□□□ -1.46
CSMD1-215ENST00000537824 AGRPO00253 132 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ABL1P00519 1130 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TRAF2Q12933 501 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TAB1Q15750 504 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SYCP2LQ5T4T6 812 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 UBE2Q1Q7Z7E8 422 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 STK32AQ8WU08 396 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TSPAN18Q96SJ8 248 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 APOL4Q9BPW4 351 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 RNF26Q9BY78 433 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SSTR3P32745 418 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 NLRX1Q86UT6 975 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PLGRKTQ9HBL7 147 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ABCB10Q9NRK6 738 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL8Q9P2G9 620 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SUGT1Q9Y2Z0 365 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CYTH3O43739 400 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ALOX15P16050 662 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 FXR1P51114 621 aaKnown RBP eCLIP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 COASYQ13057 564 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 MYBPC2Q14324 1141 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PPP4R3CPQ6ZMV5 832 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 RBM44Q6ZP01 1051 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ERICH1Q86X53 443 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ATL2Q8NHH9 583 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TAGLN3Q9UI15 199 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 GHRP10912 638 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CALB2P22676 271 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TMEM120AQ9BXJ8 343 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ANKZF1Q9H8Y5 726 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF556Q9HAH1 456 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 HPS4Q9NQG7 708 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SEL1LQ9UBV2 794 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PCDH11XQ9BZA7 1347 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF862O60290 1169 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 YY1P25490 414 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 HOXA7P31268 230 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PWP1Q13610 501 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 SDE2Q6IQ49 451 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 AGAP11Q8TF27 550 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 LAMA4Q16363 1823 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM49D1C9J1S8 452 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 GOLGA8TH3BQL2 631 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 EFCAB14O75071 495 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 CYP21A2P08686 494 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PAX3P23760 479 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PSMB9P28065 219 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 PPARGP37231 505 aaPredicted RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 NAB2Q15742 525 aa5.92□□□□□ -1.46
CSMD1-215ENST00000537824 AARS2Q5JTZ9 985 aaKnown RBP5.92□□□□□ -1.46
CSMD1-215ENST00000537824 LRRC20Q8TCA0 184 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms