RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LINC01553A4QN01 128 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 KPNA7A9QM74 516 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 PAX3P23760 479 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 PBX2P40425 430 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 NOP14P78316 857 aaKnown RBP26.05■■□□□ 1.76
HMGA2-208ENST00000537429 WDR44Q5JSH3 913 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 TMEM173Q86WV6 379 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-208ENST00000537429 HASPINQ8TF76 798 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 PBX4Q9BYU1 374 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 AAASQ9NRG9 546 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 NUB1Q9Y5A7 615 aa26.05■■□□□ 1.76
HMGA2-208ENST00000537429 CA3P07451 260 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 KLK7P49862 253 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 RAB30Q15771 203 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 WDR72Q3MJ13 1102 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 PRPF38BQ5VTL8 546 aaKnown RBP26.04■■□□□ 1.76
HMGA2-208ENST00000537429 TATDN2Q93075 761 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 SIX2Q9NPC8 291 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 GDAP2Q9NXN4 497 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 ADAM28Q9UKQ2 775 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 YBX2Q9Y2T7 364 aaKnown RBP26.04■■□□□ 1.76
HMGA2-208ENST00000537429 ARHGEF15O94989 841 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 MRE11P49959 708 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 ZNF75DP51815 510 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 LRMPQ12912 555 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 TIGD5Q53EQ6 642 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 ZNF667Q5HYK9 610 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 PHLDB3Q6NSJ2 640 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 SLC39A11Q8N1S5 342 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 FAXDC2Q96IV6 333 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 NT5C1BQ96P26 610 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 PLCB1Q9NQ66 1216 aa26.04■■□□□ 1.76
HMGA2-208ENST00000537429 TADA2AO75478 443 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 BRCC3P46736 316 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 APBA1Q02410 837 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 BCL7CQ8WUZ0 217 aaPredicted RBP26.03■■□□□ 1.76
HMGA2-208ENST00000537429 MRFAP1L1Q96HT8 127 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 IGSF21Q96ID5 467 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 LSM14BQ9BX40 385 aaKnown RBP26.03■■□□□ 1.76
HMGA2-208ENST00000537429 APEX2Q9UBZ4 518 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 PCDHB12Q9Y5F1 795 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 SNX9Q9Y5X1 595 aa26.03■■□□□ 1.76
HMGA2-208ENST00000537429 A0A1W2PPC1 479 aa26.02■■□□□ 1.76
HMGA2-208ENST00000537429 ARHGEF19Q8IW93 802 aa26.02■■□□□ 1.76
HMGA2-208ENST00000537429 SUSD3Q96L08 255 aa26.02■■□□□ 1.76
HMGA2-208ENST00000537429 PCMTD1Q96MG8 357 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-208ENST00000537429 NIF3L1Q9GZT8 377 aa26.02■■□□□ 1.76
HMGA2-208ENST00000537429 SPG21Q9NZD8 308 aa26.02■■□□□ 1.76
HMGA2-208ENST00000537429 NXF1Q9UBU9 619 aaKnown RBP26.02■■□□□ 1.76
HMGA2-208ENST00000537429 NOL4O94818 638 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 EFEMP2O95967 443 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 PPM1AP35813 382 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 BMPR1AP36894 532 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 KLHDC7AQ5VTJ3 777 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 SENP8Q96LD8 212 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 NKX2-4Q9H2Z4 354 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 FAM207AQ9NSI2 230 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-208ENST00000537429 POLIQ9UNA4 740 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 RWDD3Q9Y3V2 267 aa26.01■■□□□ 1.75
HMGA2-208ENST00000537429 M0QZQ0 153 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 ASPAP45381 313 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 TNNC1P63316 161 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 FUT10Q6P4F1 479 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 DSTYKQ6XUX3 929 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 PPM1KQ8N3J5 372 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 GPR62Q9BZJ7 368 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 GANQ9H2C0 597 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 NLRC5Q86WI3 1866 aa26■■□□□ 1.75
HMGA2-208ENST00000537429 SF3B1O75533 1304 aaKnown RBP eCLIP25.99■■□□□ 1.75
HMGA2-208ENST00000537429 ITIH6Q6UXX5 1313 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 I3L4J1 428 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 CYB561D2O14569 222 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 EPHB6O15197 1021 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 TRAPPC3O43617 180 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 ADCY5O95622 1261 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 P4HA1P13674 534 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 CTNNB1P35222 781 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 SMAD3P84022 425 aaKnown RBP25.99■■□□□ 1.75
HMGA2-208ENST00000537429 GCNT1Q02742 428 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 TAP1Q03518 808 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 GJB7Q6PEY0 223 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 DPH6Q7L8W6 267 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 LIMS2Q7Z4I7 341 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 VSTM4Q8IW00 320 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 NEK11Q8NG66 645 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 TMEM169Q96HH4 297 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 C17orf80Q9BSJ5 609 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 BCO2Q9BYV7 579 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 UBE2TQ9NPD8 197 aaPredicted RBP25.99■■□□□ 1.75
HMGA2-208ENST00000537429 MTUS1Q9ULD2 1270 aa25.99■■□□□ 1.75
HMGA2-208ENST00000537429 UCHL3P15374 230 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 CUL2Q13617 745 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 SOWAHAQ2M3V2 549 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 PPP2R2DQ66LE6 453 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 RRAGAQ7L523 313 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 SPRED2Q7Z698 418 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 RNF168Q8IYW5 571 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-208ENST00000537429 SAMD11Q96NU1 681 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 MMS19Q96T76 1030 aa25.98■■□□□ 1.75
HMGA2-208ENST00000537429 PLVAPQ9BX97 442 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms