RNA–Protein interactions for RNA: ENST00000537275.5

HMGA2-207, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,508 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-207ENST00000537275 LINC01553A4QN01 128 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 KPNA7A9QM74 516 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 PAX3P23760 479 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 PBX2P40425 430 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 NOP14P78316 857 aaKnown RBP26.05■■□□□ 1.76
HMGA2-207ENST00000537275 WDR44Q5JSH3 913 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 TMEM173Q86WV6 379 aaPredicted RBP26.05■■□□□ 1.76
HMGA2-207ENST00000537275 HASPINQ8TF76 798 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 PBX4Q9BYU1 374 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 AAASQ9NRG9 546 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 NUB1Q9Y5A7 615 aa26.05■■□□□ 1.76
HMGA2-207ENST00000537275 CA3P07451 260 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 KLK7P49862 253 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 RAB30Q15771 203 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 WDR72Q3MJ13 1102 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 PRPF38BQ5VTL8 546 aaKnown RBP26.04■■□□□ 1.76
HMGA2-207ENST00000537275 TATDN2Q93075 761 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 SIX2Q9NPC8 291 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 GDAP2Q9NXN4 497 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 ADAM28Q9UKQ2 775 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 YBX2Q9Y2T7 364 aaKnown RBP26.04■■□□□ 1.76
HMGA2-207ENST00000537275 ARHGEF15O94989 841 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 MRE11P49959 708 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 ZNF75DP51815 510 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 LRMPQ12912 555 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 TIGD5Q53EQ6 642 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 ZNF667Q5HYK9 610 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 PHLDB3Q6NSJ2 640 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 SLC39A11Q8N1S5 342 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 FAXDC2Q96IV6 333 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 NT5C1BQ96P26 610 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 PLCB1Q9NQ66 1216 aa26.04■■□□□ 1.76
HMGA2-207ENST00000537275 TADA2AO75478 443 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 BRCC3P46736 316 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 APBA1Q02410 837 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 BCL7CQ8WUZ0 217 aaPredicted RBP26.03■■□□□ 1.76
HMGA2-207ENST00000537275 MRFAP1L1Q96HT8 127 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 IGSF21Q96ID5 467 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 LSM14BQ9BX40 385 aaKnown RBP26.03■■□□□ 1.76
HMGA2-207ENST00000537275 APEX2Q9UBZ4 518 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 PCDHB12Q9Y5F1 795 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 SNX9Q9Y5X1 595 aa26.03■■□□□ 1.76
HMGA2-207ENST00000537275 A0A1W2PPC1 479 aa26.02■■□□□ 1.76
HMGA2-207ENST00000537275 ARHGEF19Q8IW93 802 aa26.02■■□□□ 1.76
HMGA2-207ENST00000537275 SUSD3Q96L08 255 aa26.02■■□□□ 1.76
HMGA2-207ENST00000537275 PCMTD1Q96MG8 357 aaPredicted RBP26.02■■□□□ 1.76
HMGA2-207ENST00000537275 NIF3L1Q9GZT8 377 aa26.02■■□□□ 1.76
HMGA2-207ENST00000537275 SPG21Q9NZD8 308 aa26.02■■□□□ 1.76
HMGA2-207ENST00000537275 NXF1Q9UBU9 619 aaKnown RBP26.02■■□□□ 1.76
HMGA2-207ENST00000537275 NOL4O94818 638 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 EFEMP2O95967 443 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 PPM1AP35813 382 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 BMPR1AP36894 532 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 KLHDC7AQ5VTJ3 777 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 SENP8Q96LD8 212 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 NKX2-4Q9H2Z4 354 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 FAM207AQ9NSI2 230 aaPredicted RBP26.01■■□□□ 1.75
HMGA2-207ENST00000537275 POLIQ9UNA4 740 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 RWDD3Q9Y3V2 267 aa26.01■■□□□ 1.75
HMGA2-207ENST00000537275 M0QZQ0 153 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 ASPAP45381 313 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 TNNC1P63316 161 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 FUT10Q6P4F1 479 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 DSTYKQ6XUX3 929 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 PPM1KQ8N3J5 372 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 GPR62Q9BZJ7 368 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 GANQ9H2C0 597 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 NLRC5Q86WI3 1866 aa26■■□□□ 1.75
HMGA2-207ENST00000537275 SF3B1O75533 1304 aaKnown RBP eCLIP25.99■■□□□ 1.75
HMGA2-207ENST00000537275 ITIH6Q6UXX5 1313 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 I3L4J1 428 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 CYB561D2O14569 222 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 EPHB6O15197 1021 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 TRAPPC3O43617 180 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 ADCY5O95622 1261 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 P4HA1P13674 534 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 CTNNB1P35222 781 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 SMAD3P84022 425 aaKnown RBP25.99■■□□□ 1.75
HMGA2-207ENST00000537275 GCNT1Q02742 428 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 TAP1Q03518 808 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 GJB7Q6PEY0 223 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 DPH6Q7L8W6 267 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 LIMS2Q7Z4I7 341 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 VSTM4Q8IW00 320 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 NEK11Q8NG66 645 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 TMEM169Q96HH4 297 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 C17orf80Q9BSJ5 609 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 BCO2Q9BYV7 579 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 UBE2TQ9NPD8 197 aaPredicted RBP25.99■■□□□ 1.75
HMGA2-207ENST00000537275 MTUS1Q9ULD2 1270 aa25.99■■□□□ 1.75
HMGA2-207ENST00000537275 UCHL3P15374 230 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 CUL2Q13617 745 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 SOWAHAQ2M3V2 549 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 PPP2R2DQ66LE6 453 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 RRAGAQ7L523 313 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 SPRED2Q7Z698 418 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 RNF168Q8IYW5 571 aaPredicted RBP25.98■■□□□ 1.75
HMGA2-207ENST00000537275 SAMD11Q96NU1 681 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 MMS19Q96T76 1030 aa25.98■■□□□ 1.75
HMGA2-207ENST00000537275 PLVAPQ9BX97 442 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms