RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 SH2D3CQ8N5H7 860 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 MAIP1Q8WWC4 291 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 ART4Q93070 314 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 IMPG2Q9BZV3 1241 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 KATNBL1Q9H079 304 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 MRPL47Q9HD33 250 aaKnown RBP9.92□□□□□ -0.82
UBE3B-207ENST00000537063 LCMT1Q9UIC8 334 aa9.92□□□□□ -0.82
UBE3B-207ENST00000537063 COL1A2P08123 1366 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 EVPLQ92817 2033 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 TP73O15350 636 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 PPFIA4O75335 1185 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 AMHR2Q16671 573 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 LLGL2Q6P1M3 1020 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ARMCX2Q7L311 632 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF467Q7Z7K2 595 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF606Q8WXB4 792 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 PDGFCQ9NRA1 345 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ADAM22Q9P0K1 906 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-207ENST00000537063 IL18RAPO95256 599 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 SRGAP2CP0DJJ0 459 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 NR1D1P20393 614 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 EIF3BP55884 814 aaKnown RBP9.91□□□□□ -0.82
UBE3B-207ENST00000537063 MYL6P60660 151 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 PPP1R15BQ5SWA1 713 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 SYDE1Q6ZW31 735 aaPredicted RBP9.91□□□□□ -0.82
UBE3B-207ENST00000537063 TRAPPC12Q8WVT3 735 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 C11orf70Q9BRQ4 267 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 HERPUD2Q9BSE4 406 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 ZNF518BQ9C0D4 1074 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 IFT122Q9HBG6 1241 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 VTA1Q9NP79 307 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 PNMA3Q9UL41 463 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 NEU2Q9Y3R4 380 aa9.91□□□□□ -0.82
UBE3B-207ENST00000537063 THAP12O43422 761 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 MYZAPP0CAP1 466 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
UBE3B-207ENST00000537063 RUFY4Q6ZNE9 571 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 RHPN2Q8IUC4 686 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 CXorf38Q8TB03 319 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 FBXO25Q8TCJ0 367 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 BCO2Q9BYV7 579 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 CDT1Q9H211 546 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.82
UBE3B-207ENST00000537063 MINDY3Q9H8M7 445 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 PARVAQ9NVD7 372 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 ERAP1Q9NZ08 941 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 CWC15Q9P013 229 aaKnown RBP9.9□□□□□ -0.82
UBE3B-207ENST00000537063 PASKQ96RG2 1323 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 B4GALT5O43286 388 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 IQCF3P0C7M6 154 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 HARSP12081 509 aaKnown RBP9.9□□□□□ -0.82
UBE3B-207ENST00000537063 LAMC2Q13753 1193 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 EFCAB12Q6NXP0 572 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 PPTC7Q8NI37 304 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 TMEM109Q9BVC6 243 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 RNPEPQ9H4A4 650 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 CISHQ9NSE2 258 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 SNX24Q9Y343 169 aa9.9□□□□□ -0.82
UBE3B-207ENST00000537063 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.9□□□□□ -0.82
UBE3B-207ENST00000537063 TMEM191CA6NGB0 347 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 LGALS2P05162 132 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 TMEM191BP0C7N4 346 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 GSCP56915 257 aaPredicted RBP9.9□□□□□ -0.83
UBE3B-207ENST00000537063 ZNF252P-AS1Q0IIN9 211 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 PTK6Q13882 451 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 TTLL12Q14166 644 aaPredicted RBP9.9□□□□□ -0.83
UBE3B-207ENST00000537063 KCTD19Q17RG1 926 aaPredicted RBP9.9□□□□□ -0.83
UBE3B-207ENST00000537063 EEF1DP3Q658K8 133 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 KCTD16Q68DU8 428 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 RHBDF2Q6PJF5 856 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 PASD1Q8IV76 773 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 RHOT1Q8IXI2 618 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 OR2W6PQ8NHA6 318 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 UBLCP1Q8WVY7 318 aaPredicted RBP9.9□□□□□ -0.83
UBE3B-207ENST00000537063 TLCD1Q96CP7 247 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 SYT17Q9BSW7 474 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 TRIM31Q9BZY9 425 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 DCLK3Q9C098 648 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 WHRNQ9P202 907 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 MORF4L1Q9UBU8 362 aa9.9□□□□□ -0.83
UBE3B-207ENST00000537063 ECEL1O95672 775 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 CALB1P05937 261 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 GJB1P08034 283 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 PTPN7P35236 360 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 CLCN3P51790 818 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 PMS2P54278 862 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 TAS2R40P59535 323 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 GNGT1P63211 74 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 LRRC38Q5VT99 294 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 FOXR1Q6PIV2 292 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 NIPA2Q8N8Q9 360 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 EXD1Q8NHP7 514 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.89□□□□□ -0.83
UBE3B-207ENST00000537063 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
UBE3B-207ENST00000537063 VRTNQ9H8Y1 702 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms