RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ABHD14A-ACY1A0A1B0GW23 586 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 TAF4O00268 1085 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 EFCAB14O75071 495 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 SNAI1O95863 264 aaPredicted RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 AOC1P19801 751 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 FBLP22087 321 aaKnown RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 CTNNB1P35222 781 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 CASP7P55210 303 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 TNFAIP2Q03169 654 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 APOBRQ0VD83 1088 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 ADAM15Q13444 863 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 N4BP2L1Q5TBK1 243 aaPredicted RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 CCDC30Q5VVM6 783 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 MRGPRGQ86SM5 289 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 SLITRK4Q8IW52 837 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 TEX11Q8IYF3 940 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 MSL3Q8N5Y2 521 aaKnown RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 MB21D1Q8N884 522 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 SMRP1Q8NCR6 262 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 GIMAP8Q8ND71 665 aaPredicted RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.79□□□□□ -1.64
YBX3-205ENST00000536107 MSLNLQ96KJ4 702 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 C12orf42Q96LP6 360 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 LMF1Q96S06 567 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 SMOC2Q9H3U7 446 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 MARCH2Q9P0N8 246 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 CROTQ9UKG9 612 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 NR2E1Q9Y466 385 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 DMRT1Q9Y5R6 373 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 COL4A4P53420 1690 aaPredicted RBP4.79□□□□□ -1.64
YBX3-205ENST00000536107 PHIPQ8WWQ0 1821 aa4.79□□□□□ -1.64
YBX3-205ENST00000536107 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 ADCY6O43306 1168 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 CBFA2T2O43439 604 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 FLOT1O75955 427 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 PDE8BO95263 885 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 ADH4P08319 380 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 MYL3P08590 195 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 PPP2R1AP30153 589 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 KRTAP10-9P60411 292 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 COASYQ13057 564 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 SOWAHCQ53LP3 525 aaPredicted RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 SPECC1Q5M775 1068 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 RALYLQ86SE5 291 aaKnown RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 TLK2Q86UE8 772 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 FOXP4Q8IVH2 680 aaPredicted RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 ACER1Q8TDN7 264 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 CACTINQ8WUQ7 758 aaKnown RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 RNF34Q969K3 372 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 NOL10Q9BSC4 688 aaKnown RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 YIPF4Q9BSR8 244 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 STK31Q9BXU1 1019 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 KIAA1683Q9H0B3 1180 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 LMAN2LQ9H0V9 348 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 DHX36Q9H2U1 1008 aaKnown RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 ABHD16BQ9H3Z7 469 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 CLEC1BQ9P126 229 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 WHRNQ9P202 907 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 DENND2AQ9ULE3 1009 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 BARX2Q9UMQ3 279 aaPredicted RBP4.78□□□□□ -1.64
YBX3-205ENST00000536107 BPTFQ12830 3046 aa4.78□□□□□ -1.64
YBX3-205ENST00000536107 SPEGQ15772 3267 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 MROH7-TTC4A0A0A0MT08 1334 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SALL1Q9NSC2 1324 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SLC30A4O14863 429 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 GRM6O15303 877 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 CTAGE5O15320 804 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SORBS3O60504 671 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 VAMP4O75379 141 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 HLA-DOAP06340 250 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 C1SP09871 688 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SP9P0CG40 484 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 ATF7P17544 494 aaPredicted RBP4.77□□□□□ -1.65
YBX3-205ENST00000536107 STAT3P40763 770 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 TMPOP42166 694 aaKnown RBP4.77□□□□□ -1.65
YBX3-205ENST00000536107 MCAMP43121 646 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 NRIP1P48552 1158 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 RHBDL3P58872 404 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 GSTO1P78417 241 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SHC2P98077 582 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 TMEM132BQ14DG7 1078 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 DPY19L1Q2PZI1 675 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 LRRC24Q50LG9 513 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SPTY2D1Q68D10 685 aaPredicted RBP4.77□□□□□ -1.65
YBX3-205ENST00000536107 IL31Q6EBC2 164 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 TRMT10BQ6PF06 316 aaKnown RBP4.77□□□□□ -1.65
YBX3-205ENST00000536107 ATF7IPQ6VMQ6 1270 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.77□□□□□ -1.65
YBX3-205ENST00000536107 RIOX2Q8IUF8 465 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 EFHBQ8N7U6 833 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 SUMF1Q8NBK3 374 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 LINS1Q8NG48 757 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 LARP4BQ92615 738 aaKnown RBP4.77□□□□□ -1.65
YBX3-205ENST00000536107 TMEM209Q96SK2 561 aa4.77□□□□□ -1.65
YBX3-205ENST00000536107 TM9SF2Q99805 663 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms