RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 RFX1P22670 979 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 PBX3P40426 434 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 MXI1P50539 228 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 ENOX2Q16206 610 aaKnown RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 DUSP6Q16828 381 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 EXOC3L4Q17RC7 722 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 DUOXA2Q1HG44 320 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 XKR4Q5GH76 650 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 UBXN11Q5T124 520 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 PDE12Q6L8Q7 609 aaKnown RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 ECHDC2Q86YB7 292 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 RNF135Q8IUD6 432 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 FMNL3Q8IVF7 1028 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 CCDC127Q96BQ5 260 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 FAXDC2Q96IV6 333 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 TCF25Q9BQ70 676 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 MRPL9Q9BYD2 267 aaKnown RBP11.63□□□□□ -0.55
UBE3B-205ENST00000535900 CWH43Q9H720 699 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 PLCB1Q9NQ66 1216 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 INTS13Q9NVM9 706 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 LZTS1Q9Y250 596 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 GIT1Q9Y2X7 761 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 PCDHB2Q9Y5E7 798 aa11.63□□□□□ -0.55
UBE3B-205ENST00000535900 LRRIQ3A6PVS8 624 aaPredicted RBP11.62□□□□□ -0.55
UBE3B-205ENST00000535900 TEX33O43247 280 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 NRDCO43847 1150 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 TNNC2P02585 160 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 DLATP10515 647 aaKnown RBP11.62□□□□□ -0.55
UBE3B-205ENST00000535900 KCNE1P15382 129 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 ERVFC1P60507 584 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 FAM189BP81408 668 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 RBM10P98175 930 aaKnown RBP11.62□□□□□ -0.55
UBE3B-205ENST00000535900 MYL7Q01449 175 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 ZACNQ401N2 412 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 C1orf220Q5T0J3 134 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 LLGL2Q6P1M3 1020 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 ALKAL1Q6UXT8 129 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 FBXL13Q8NEE6 735 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 ZSWIM2Q8NEG5 633 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 HELQQ8TDG4 1101 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 SNX27Q96L92 541 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 CASD1Q96PB1 797 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
UBE3B-205ENST00000535900 PDE11AQ9HCR9 933 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 RNF19AQ9NV58 838 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 CNTN3Q9P232 1028 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 IPPQ9Y573 584 aa11.62□□□□□ -0.55
UBE3B-205ENST00000535900 A0A1W2PQJ5 194 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 LACTBL1A8MY62 500 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 FSCN2O14926 492 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 CXCL8P10145 99 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 ITGA4P13612 1032 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TRIM21P19474 475 aaKnown RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TNFSF9P41273 254 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 KRT17Q04695 432 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 PPP3CAQ08209 521 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TMEM132DQ14C87 1099 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SYCP1Q15431 976 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 CLLU1OSQ5K130 101 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SV2AQ7L0J3 742 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TMC7Q7Z402 723 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 ZSCAN30Q86W11 494 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 CDR2LQ86X02 465 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SMG8Q8ND04 991 aaKnown RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 CCDC112Q8NEF3 446 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 ZNF397Q8NF99 534 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 PLEKHO2Q8TD55 490 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 TAF4BQ92750 862 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 RPGRIP1Q96KN7 1286 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 PHF7Q9BWX1 381 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 NUCKS1Q9H1E3 243 aaKnown RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 FAM124BQ9H5Z6 455 aaPredicted RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 NGRNQ9NPE2 291 aaKnown RBP11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SLC38A7Q9NVC3 462 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 GCNT4Q9P109 453 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 MYO6Q9UM54 1294 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 SIK3Q9Y2K2 1263 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 ZKSCAN5Q9Y2L8 839 aa11.61□□□□□ -0.55
UBE3B-205ENST00000535900 INPPL1O15357 1258 aa11.6□□□□□ -0.55
UBE3B-205ENST00000535900 RECQL4O94761 1208 aa11.6□□□□□ -0.55
UBE3B-205ENST00000535900 C4BPAP04003 597 aaKnown RBP11.6□□□□□ -0.55
UBE3B-205ENST00000535900 TMEM191BP0C7N4 346 aa11.6□□□□□ -0.55
UBE3B-205ENST00000535900 ATF7P17544 494 aaPredicted RBP11.6□□□□□ -0.55
UBE3B-205ENST00000535900 CYP3A5P20815 502 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms