RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TPRG1Q6ZUI0 275 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 CCDC83Q8IWF9 413 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 CD302Q8IX05 232 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 AK8Q96MA6 479 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 TBC1D32Q96NH3 1257 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 ZNF334Q9HCZ1 680 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 SPATA6Q9NWH7 488 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 ZMYM5Q9UJ78 669 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 ODF2LQ9ULJ1 636 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 POLIQ9UNA4 740 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 I3L4J1 428 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 PRRG1O14668 218 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CHADO15335 359 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CLDN3O15551 220 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 SEC24BO95487 1268 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CYP11A1P05108 521 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CNR2P34972 360 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 GUCY1B3Q02153 619 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 MTAPQ13126 283 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 PLD1Q13393 1074 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CTXN3Q4LDR2 81 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 TMEM119Q4V9L6 283 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 IQCEQ6IPM2 695 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 PDZD4Q76G19 769 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 DGLUCYQ7Z3D6 616 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 ELMOD1Q8N336 334 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 SYNPOQ8N3V7 929 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CELF5Q8N6W0 485 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 C18orf25Q96B23 403 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 TCEAL4Q96EI5 215 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 MCRS1Q96EZ8 462 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 ZNF512Q96ME7 567 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CCSER1Q9C0I3 900 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CYP4F11Q9HBI6 524 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 HEBP1Q9NRV9 189 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 UBQLN1Q9UMX0 589 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 DERAQ9Y315 318 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 KIF3AQ9Y496 699 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 NUB1Q9Y5A7 615 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 STYXL1Q9Y6J8 313 aa12.23□□□□□ -0.45
CLSTN3-206ENST00000535668 CHD6Q8TD26 2715 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 FOXD2O60548 495 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 FGF19O95750 216 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 CHRNB1P11230 501 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 CCR3P51677 355 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 LMNB2Q03252 620 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 YWHAHQ04917 246 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 SMARCB1Q12824 385 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 STRN3Q13033 797 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 PPP2R5DQ14738 602 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 SPATA1Q5VX52 437 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 CENPPQ6IPU0 288 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 VITQ6UXI7 678 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 KIAA2013Q8IYS2 634 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 SPEM1Q8N4L4 309 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 FAM184AQ8NB25 1140 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 ZBTB45Q96K62 511 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 ZSWIM3Q96MP5 696 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 PNMA5Q96PV4 448 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 CORO1BQ9BR76 489 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 TCHPQ9BT92 498 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 HAPLN2Q9GZV7 340 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 C8orf33Q9H7E9 229 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 POLD4Q9HCU8 107 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
CLSTN3-206ENST00000535668 A0A0B4J269 797 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 CCDC163A0A0D9SF12 145 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 ANO9A1A5B4 782 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 MYBPHLA2RUH7 354 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 PIRO00625 290 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 NRG2O14511 850 aaPredicted RBP12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 SLC16A4O15374 487 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 XPOTO43592 962 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 CD72P21854 359 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 LILRA4P59901 499 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 NBR1Q14596 966 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 ING5Q8WYH8 240 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 SECISBP2LQ93073 1101 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 PSMG2Q969U7 264 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 FIZ1Q96SL8 496 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 MKNK1Q9BUB5 465 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 BRD9Q9H8M2 597 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 SMG5Q9UPR3 1016 aaKnown RBP12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 COL4A3Q01955 1670 aa12.21□□□□□ -0.45
CLSTN3-206ENST00000535668 USP24Q9UPU5 2620 aa12.21□□□□□ -0.46
CLSTN3-206ENST00000535668 MAP1BP46821 2468 aaKnown RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 MYH11P35749 1972 aa12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 MED19A0JLT2 244 aaPredicted RBP12.2□□□□□ -0.46
CLSTN3-206ENST00000535668 PP2D1A8MPX8 630 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms