RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ERVK-21P61565 698 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 PLCB2Q00722 1185 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 KCNMA1Q12791 1236 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 WDR72Q3MJ13 1102 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SV2CQ496J9 727 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 TMEM173Q86WV6 379 aaPredicted RBP16.75■□□□□ 0.27
CNN1-202ENST00000535659 HASPINQ8TF76 798 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 C17orf80Q9BSJ5 609 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 PI4K2AQ9BTU6 479 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 IMPG2Q9BZV3 1241 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 VRTNQ9H8Y1 702 aa16.75■□□□□ 0.27
CNN1-202ENST00000535659 SLC9A1P19634 815 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 DNAJB2P25686 324 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 PON1P27169 355 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 CTNNB1P35222 781 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 BRCC3P46736 316 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.27
CNN1-202ENST00000535659 KRT17Q04695 432 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 ZNF699Q32M78 642 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 TIGD5Q53EQ6 642 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 DSTYKQ6XUX3 929 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 KLHL23Q8NBE8 558 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 BCL7CQ8WUZ0 217 aaPredicted RBP16.74■□□□□ 0.27
CNN1-202ENST00000535659 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 INTS2Q9H0H0 1204 aaKnown RBP16.74■□□□□ 0.27
CNN1-202ENST00000535659 GDAP2Q9NXN4 497 aa16.74■□□□□ 0.27
CNN1-202ENST00000535659 C5orf67F2Z3F1 127 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 CBFA2T2O43439 604 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 FGF18O76093 207 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 PLCB3Q01970 1234 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 ZNF667Q5HYK9 610 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 SPOPLQ6IQ16 392 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 SARM1Q6SZW1 724 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 TATDN2Q93075 761 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 ELMO3Q96BJ8 720 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 TIFAQ96CG3 184 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 ERGIC2Q96RQ1 377 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 GPR62Q9BZJ7 368 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 APOBEC3GQ9HC16 384 aaKnown RBP16.73■□□□□ 0.27
CNN1-202ENST00000535659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNN1-202ENST00000535659 GCNT4Q9P109 453 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
CNN1-202ENST00000535659 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 GBF1Q92538 1859 aa16.73■□□□□ 0.27
CNN1-202ENST00000535659 I3L4J1 428 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 M0QZQ0 153 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 CYB561D2O14569 222 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 CLSTN1O94985 981 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 EFEMP2O95967 443 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 TPM3P06753 285 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 LRMPQ12912 555 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 ELAVL2Q12926 359 aaKnown RBP16.72■□□□□ 0.27
CNN1-202ENST00000535659 FUT10Q6P4F1 479 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 TRIM65Q6PJ69 517 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 DPH6Q7L8W6 267 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 SPRED2Q7Z698 418 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 DDX53Q86TM3 631 aaKnown RBP16.72■□□□□ 0.27
CNN1-202ENST00000535659 FAXDC2Q96IV6 333 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 NT5C1BQ96P26 610 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 XPO4Q9C0E2 1151 aaKnown RBP16.72■□□□□ 0.27
CNN1-202ENST00000535659 MTUS1Q9ULD2 1270 aa16.72■□□□□ 0.27
CNN1-202ENST00000535659 SF3B1O75533 1304 aaKnown RBP eCLIP16.72■□□□□ 0.27
CNN1-202ENST00000535659 GOLGA6L3A6NEY3 463 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 AP5Z1O43299 807 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 HUS1O60921 280 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 P4HA1P13674 534 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 TNNC1P63316 161 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 NOP14P78316 857 aaKnown RBP16.71■□□□□ 0.27
CNN1-202ENST00000535659 SYCP1Q15431 976 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 TAS1R1Q7RTX1 841 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 MMS19Q96T76 1030 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 STK39Q9UEW8 545 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 PUF60Q9UHX1 559 aaKnown RBP16.71■□□□□ 0.27
CNN1-202ENST00000535659 SIK3Q9Y2K2 1263 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 CHD9Q3L8U1 2897 aa16.71■□□□□ 0.27
CNN1-202ENST00000535659 KIAA1671Q9BY89 1806 aa16.71■□□□□ 0.26
CNN1-202ENST00000535659 A0A1W2PQC6 194 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 ARHGEF37A1IGU5 675 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 FAM163BP0C2L3 166 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 SOWAHAQ2M3V2 549 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 PHLDB3Q6NSJ2 640 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 DPY19L2P1Q6NXN4 242 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 RNF168Q8IYW5 571 aaPredicted RBP16.7■□□□□ 0.26
CNN1-202ENST00000535659 TOP6BLQ8N6T0 577 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 FBXO22Q8NEZ5 403 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 SPPL3Q8TCT6 385 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
CNN1-202ENST00000535659 C11orf84Q9BUA3 381 aaPredicted RBP16.7■□□□□ 0.26
CNN1-202ENST00000535659 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 CERS4Q9HA82 394 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 ALG13Q9NP73 1137 aaKnown RBP16.7■□□□□ 0.26
CNN1-202ENST00000535659 PCDHB8Q9UN66 801 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 POLIQ9UNA4 740 aa16.7■□□□□ 0.26
CNN1-202ENST00000535659 LZTS1Q9Y250 596 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms