RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 NOLC1Q14978 699 aaKnown RBP eCLIP23.26■■□□□ 1.31
SSH3-211ENST00000534112 TEAD2Q15562 447 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 FAM184AQ8NB25 1140 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 BEST2Q8NFU1 509 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 SPIRE2Q8WWL2 714 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 MMTAG2Q9BU76 263 aaKnown RBP23.26■■□□□ 1.31
SSH3-211ENST00000534112 TIPINQ9BVW5 301 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 GPR88Q9GZN0 384 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 PARD6AQ9NPB6 346 aa23.26■■□□□ 1.31
SSH3-211ENST00000534112 CDV3Q9UKY7 258 aaKnown RBP23.26■■□□□ 1.31
SSH3-211ENST00000534112 HEPACAM2A8MVW5 462 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 OAZ2O95190 189 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 CHRNB1P11230 501 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 GUCY2CP25092 1073 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 CCR3P51677 355 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 YWHAHQ04917 246 aaPredicted RBP23.25■■□□□ 1.31
SSH3-211ENST00000534112 TMEM130Q8N3G9 435 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 CELF5Q8N6W0 485 aaKnown RBP23.25■■□□□ 1.31
SSH3-211ENST00000534112 TMEM161BQ8NDZ6 487 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 SHKBP1Q8TBC3 707 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 SLITRK6Q9H5Y7 841 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 KCNG1Q9UIX4 513 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 RAB23Q9ULC3 237 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 TIMM13Q9Y5L4 95 aaPredicted RBP23.25■■□□□ 1.31
SSH3-211ENST00000534112 NCANO14594 1321 aa23.25■■□□□ 1.31
SSH3-211ENST00000534112 M0QZQ0 153 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 ARNTLO00327 626 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 LAD1O00515 517 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 CLDN3O15551 220 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 EIF5BO60841 1220 aaKnown RBP23.24■■□□□ 1.31
SSH3-211ENST00000534112 VNN2O95498 520 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 PLS3P13797 630 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 CCNE1P24864 410 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 MCL1Q07820 350 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 RAD51AP2Q09MP3 1159 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 LPAL2Q16609 132 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 ZPBP2Q6X784 338 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 DTHD1Q6ZMT9 781 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 LRRC3Q9BY71 257 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 PLEKHA5Q9HAU0 1116 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 YIPF1Q9Y548 306 aa23.24■■□□□ 1.31
SSH3-211ENST00000534112 SEC24BO95487 1268 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 CXCL8P10145 99 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 MAPTP10636 758 aaKnown RBP23.23■■□□□ 1.31
SSH3-211ENST00000534112 LRPAP1P30533 357 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 PRPHP41219 470 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 CXCL12P48061 93 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 SMTNP53814 917 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 MLLT6P55198 1093 aaPredicted RBP23.23■■□□□ 1.31
SSH3-211ENST00000534112 SPAG1Q07617 926 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 GAS6Q14393 721 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 E2F7Q96AV8 911 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 RSPRY1Q96DX4 576 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 CNTNAP3BQ96NU0 1288 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 PGLYRP2Q96PD5 576 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 OXCT2Q9BYC2 517 aaPredicted RBP23.23■■□□□ 1.31
SSH3-211ENST00000534112 CNTNAP3Q9BZ76 1288 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 CACNA1BQ00975 2339 aa23.23■■□□□ 1.31
SSH3-211ENST00000534112 ACACBO00763 2458 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 DCDC2BA2VCK2 349 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 CLTAP09496 248 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 OR4Q2P0C623 313 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 SATB1Q01826 763 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 SPEM2Q0P670 501 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 DUSP4Q13115 394 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 ZRSR1Q15695 479 aaKnown RBP23.22■■□□□ 1.31
SSH3-211ENST00000534112 ZBTB6Q15916 424 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 LAIR1Q6GTX8 287 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 YAF2Q8IY57 180 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 CSGALNACT1Q8TDX6 532 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 ZSCAN31Q96LW9 406 aaPredicted RBP23.22■■□□□ 1.31
SSH3-211ENST00000534112 RTKNQ9BST9 563 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 HAPLN2Q9GZV7 340 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 DNAJC25Q9H1X3 360 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 CRISPLD1Q9H336 500 aa23.22■■□□□ 1.31
SSH3-211ENST00000534112 A0A1W2PRU2 124 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 TTC26A0AVF1 554 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 CHADO15335 359 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 AARSP49588 968 aaKnown RBP eCLIP23.21■■□□□ 1.31
SSH3-211ENST00000534112 EPHB3P54753 998 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 GPR17Q13304 367 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 PLD1Q13393 1074 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 USP37Q86T82 979 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 TMC8Q8IU68 726 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 SPEM1Q8N4L4 309 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 KIF12Q96FN5 646 aa23.21■■□□□ 1.31
SSH3-211ENST00000534112 OR6C75A6NL08 312 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 CYP3A5P20815 502 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 MATR3P43243 847 aaKnown RBP eCLIP23.2■■□□□ 1.3
SSH3-211ENST00000534112 FCHO2Q0JRZ9 810 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 HYIQ5T013 277 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 PRR23BQ6ZRT6 265 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 ARID3BQ8IVW6 561 aaPredicted RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 SYT2Q8N9I0 419 aaPredicted RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 MSANTD3Q96H12 275 aa23.2■■□□□ 1.3
SSH3-211ENST00000534112 C8orf33Q9H7E9 229 aaPredicted RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 SH2B1Q9NRF2 756 aaPredicted RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 UBQLN1Q9UMX0 589 aaKnown RBP23.2■■□□□ 1.3
SSH3-211ENST00000534112 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms