RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 OR5B17Q8NGF7 314 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 NOC3LQ8WTT2 800 aaKnown RBP10.46□□□□□ -0.73
SSBP3-215ENST00000533946 FGF13Q92913 245 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 RSPRY1Q96DX4 576 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 MCRS1Q96EZ8 462 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 KXD1Q9BQD3 176 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 LPIN3Q9BQK8 851 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 TRIM9Q9C026 710 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PDE11AQ9HCR9 933 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 SLC38A7Q9NVC3 462 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 TMLHEQ9NVH6 421 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 ZDHHC7Q9NXF8 308 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 RCOR1Q9UKL0 485 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 CA14Q9ULX7 337 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 PCDHB8Q9UN66 801 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 USTQ9Y2C2 406 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 NUB1Q9Y5A7 615 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 NME7Q9Y5B8 376 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 NUMBLQ9Y6R0 609 aa10.46□□□□□ -0.73
SSBP3-215ENST00000533946 CARNS1A5YM72 827 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 SHISA7A6NL88 538 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 ANHXE9PGG2 379 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 CLIC2O15247 247 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 ACTN4O43707 911 aaKnown RBP10.45□□□□□ -0.74
SSBP3-215ENST00000533946 KLRC4O43908 158 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 CUTAO60888 179 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 YEATS4O95619 227 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 AVPR2P30518 371 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 EHHADHQ08426 723 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 ELAVL2Q12926 359 aaKnown RBP10.45□□□□□ -0.74
SSBP3-215ENST00000533946 TDGQ13569 410 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 TMEM132DQ14C87 1099 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 PRSS36Q5K4E3 855 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 RESP18Q5W5W9 173 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 CCDC73Q6ZRK6 1079 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 EPM2AIP1Q7L775 607 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-215ENST00000533946 OTOP3Q7RTS5 596 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 OSTM1Q86WC4 334 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 NPAS3Q8IXF0 933 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 NELFCDQ8IXH7 590 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 ZNF461Q8TAF7 563 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 PLEKHO2Q8TD55 490 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 GPR152Q8TDT2 470 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 HDAC7Q8WUI4 952 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 POMGNT1Q8WZA1 660 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 SENP8Q96LD8 212 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 CORO1BQ9BR76 489 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 LRRC3Q9BY71 257 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 DNAJC25Q9H1X3 360 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 GOLPH3LQ9H4A5 285 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 PLEKHA5Q9HAU0 1116 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 CYP4F11Q9HBI6 524 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 ZNF334Q9HCZ1 680 aaPredicted RBP10.45□□□□□ -0.74
SSBP3-215ENST00000533946 DPP3Q9NY33 737 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 EPS15L1Q9UBC2 864 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 SIX4Q9UIU6 781 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 UBQLN1Q9UMX0 589 aaKnown RBP10.45□□□□□ -0.74
SSBP3-215ENST00000533946 INSL5Q9Y5Q6 135 aa10.45□□□□□ -0.74
SSBP3-215ENST00000533946 DMXL1Q9Y485 3027 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 SYN3O14994 580 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 RHOP08100 348 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ATF2P15336 505 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 CD72P21854 359 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 FCARP24071 287 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 HOXC13P31276 330 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ME1P48163 572 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 CASP4P49662 377 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 GPR15P49685 360 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 GPC5P78333 572 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ASIC1P78348 528 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 NHLH1Q02575 133 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 TWF1Q12792 350 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 DUSP4Q13115 394 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 MTMR3Q13615 1198 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 LIN9Q5TKA1 542 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 WSCD1Q658N2 575 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 TANGO2Q6ICL3 276 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 DSTYKQ6XUX3 929 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ANKS3Q6ZW76 656 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 SIX5Q8N196 739 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 C1orf127Q8N9H9 656 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 RDH13Q8NBN7 331 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 LEO1Q8WVC0 666 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-215ENST00000533946 SCFD1Q8WVM8 642 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ZNF396Q96N95 335 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-215ENST00000533946 LRRC3BQ96PB8 259 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ACCSQ96QU6 501 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 RHOBTB2Q9BYZ6 727 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 SLC39A2Q9NP94 309 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 STK39Q9UEW8 545 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 MTF2Q9Y483 593 aaPredicted RBP10.44□□□□□ -0.74
SSBP3-215ENST00000533946 PIEZO1Q92508 2521 aa10.44□□□□□ -0.74
SSBP3-215ENST00000533946 ARHGEF37A1IGU5 675 aa10.43□□□□□ -0.74
SSBP3-215ENST00000533946 H0Y858 1186 aa10.43□□□□□ -0.74
SSBP3-215ENST00000533946 PRRG1O14668 218 aa10.43□□□□□ -0.74
SSBP3-215ENST00000533946 TRAPPC3O43617 180 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms