RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 TRAPPC3O43617 180 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 B3GAT3O94766 335 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 NPTXRO95502 500 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 SYPP08247 313 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 IGFBP6P24592 240 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-215ENST00000533818 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.541e-5■□□□□ 9.3
CSDE1-215ENST00000533818 P2RY2P41231 377 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 MCM2P49736 904 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 PDE1AP54750 535 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 NBR1Q14596 966 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 PEAR1Q5VY43 1037 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-215ENST00000533818 JAKMIP3Q5VZ66 844 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 TPGS2Q68CL5 300 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 FMNL3Q8IVF7 1028 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 MDGA1Q8NFP4 955 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 OLIG1Q8TAK6 271 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 SLC7A3Q8WY07 619 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 P2RY13Q9BPV8 354 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 NXF1Q9UBU9 619 aaKnown RBP11.7□□□□□ -0.54
CSDE1-215ENST00000533818 SMCO2A6NFE2 343 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 OTOL1A6NHN0 477 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 I3L4J1 428 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 PTGESO14684 152 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 CBFA2T3O75081 653 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 GJB3O75712 270 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 C6P13671 934 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 ARF4P18085 180 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 LMBRD2Q68DH5 695 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 ANO5Q75V66 913 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 RABEPKQ7Z6M1 372 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 RALYLQ86SE5 291 aaKnown RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 CDR2LQ86X02 465 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 FRMD1Q8N878 549 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 SPIRE2Q8WWL2 714 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 WBP1Q96G27 269 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 FAM83CQ9BQN1 747 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 SEMA4CQ9C0C4 833 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 UNC45AQ9H3U1 944 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 EBF3Q9H4W6 596 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 HPS4Q9NQG7 708 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 KCNK4Q9NYG8 393 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
CSDE1-215ENST00000533818 IL17BQ9UHF5 180 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 ABCA12Q86UK0 2595 aa11.69□□□□□ -0.54
CSDE1-215ENST00000533818 E9PAM4 449 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 ASAP2O43150 1006 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 GAS7O60861 476 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 ALDH1A2O94788 518 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PRAMEF12O95522 483 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 HLA-EP13747 358 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 RXRAP19793 462 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 IL12RB1P42701 662 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 C2orf27AQ580R0 203 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 GPR158Q5T848 1215 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PLA2G4FQ68DD2 849 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 NAIF1Q69YI7 327 aaPredicted RBP11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 MIER3Q7Z3K6 550 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 SETD7Q8WTS6 366 aaKnown RBP11.68□□□□□ -0.54
CSDE1-215ENST00000533818 EZH1Q92800 747 aaPredicted RBP11.68□□□□□ -0.54
CSDE1-215ENST00000533818 RIT2Q99578 217 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PI4K2AQ9BTU6 479 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 LRRC3Q9BY71 257 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 GLT8D2Q9H1C3 349 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PCOLCE2Q9UKZ9 415 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PTPRBP23467 1997 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 PI4KAP42356 2102 aa11.68□□□□□ -0.54
CSDE1-215ENST00000533818 GOLGA4Q13439 2230 aaKnown RBP11.67□□□□□ -0.54
CSDE1-215ENST00000533818 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TMEM189-UBE2V1I3L0A0 370 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TLX3O43711 291 aaPredicted RBP11.67□□□□□ -0.54
CSDE1-215ENST00000533818 ATXN1LP0C7T5 689 aaKnown RBP11.67□□□□□ -0.54
CSDE1-215ENST00000533818 BRCC3P46736 316 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 NPEPPSP55786 919 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 PTENP60484 403 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 CXADRP78310 365 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 SEMG2Q02383 582 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 NAB2Q15742 525 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TMC8Q8IU68 726 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 DEFB119Q8N690 84 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 RDM1Q8NG50 284 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 PNMA5Q96PV4 448 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
CSDE1-215ENST00000533818 ATXN3LQ9H3M9 355 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 DIAPH3Q9NSV4 1193 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 TOR4AQ9NXH8 423 aa11.67□□□□□ -0.54
CSDE1-215ENST00000533818 AFF4Q9UHB7 1163 aaKnown RBP11.67□□□□□ -0.54
CSDE1-215ENST00000533818 MAFFQ9ULX9 164 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms