RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TNRC6BQ9UPQ9 1833 aaKnown RBP13.55□□□□□ -0.24
SVIP-205ENST00000533774 OBSL1O75147 1896 aa13.55□□□□□ -0.24
SVIP-205ENST00000533774 SMG1Q96Q15 3661 aaKnown RBP13.54□□□□□ -0.24
SVIP-205ENST00000533774 N4BP3O15049 544 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 LYPLA2O95372 231 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 VNN2O95498 520 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 TNK2Q07912 1038 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 KRT32Q14532 448 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 PLK5Q496M5 336 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
SVIP-205ENST00000533774 SH3PXD2AQ5TCZ1 1133 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 PIGOQ8TEQ8 1089 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 KCNB2Q92953 911 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 ZC3H10Q96K80 434 aaKnown RBP13.54□□□□□ -0.24
SVIP-205ENST00000533774 MKNK1Q9BUB5 465 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 EDEM2Q9BV94 578 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 CCDC113Q9H0I3 377 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 DUSP15Q9H1R2 295 aaPredicted RBP13.54□□□□□ -0.24
SVIP-205ENST00000533774 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
SVIP-205ENST00000533774 IGSF10Q6WRI0 2623 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 TAF4O00268 1085 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 DCLK1O15075 740 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 USO1O60763 962 aaKnown RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 CCDC192P0DO97 292 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 NEK8Q86SG6 692 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 RALGPS2Q86X27 583 aaPredicted RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 TMC8Q8IU68 726 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 TMEM130Q8N3G9 435 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 OXER1Q8TDS5 423 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 ZCCHC14Q8WYQ9 949 aaKnown RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 CHFRQ96EP1 664 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 MSANTD3Q96H12 275 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 JAKMIP1Q96N16 626 aaKnown RBP13.53□□□□□ -0.24
SVIP-205ENST00000533774 VPS45Q9NRW7 570 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 FREM2Q5SZK8 3169 aa13.53□□□□□ -0.24
SVIP-205ENST00000533774 CCDC163A0A0D9SF12 145 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 A0A1W2PRU2 124 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 TMEM8BA6NDV4 472 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 DTNBO60941 627 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 EVCP57679 992 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 SSRP1Q08945 709 aaKnown RBP13.52□□□□□ -0.25
SVIP-205ENST00000533774 PRPF4BQ13523 1007 aaKnown RBP13.52□□□□□ -0.25
SVIP-205ENST00000533774 NT5DC1Q5TFE4 455 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 RNF19BQ6ZMZ0 732 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 ARID3BQ8IVW6 561 aaPredicted RBP13.52□□□□□ -0.25
SVIP-205ENST00000533774 YAF2Q8IY57 180 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 CEP120Q8N960 986 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 ZMAT2Q96NC0 199 aaKnown RBP13.52□□□□□ -0.25
SVIP-205ENST00000533774 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 CRISPLD1Q9H336 500 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 SLITRK6Q9H5Y7 841 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 ASAH2Q9NR71 780 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 GJB4Q9NTQ9 266 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 SNX14Q9Y5W7 946 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 CEP192Q8TEP8 1941 aa13.52□□□□□ -0.25
SVIP-205ENST00000533774 BPTFQ12830 3046 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 LNP1A1A4G5 178 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 MEFVO15553 781 aaPredicted RBP13.51□□□□□ -0.25
SVIP-205ENST00000533774 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 GABBR2O75899 941 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 GCFC2P16383 781 aaKnown RBP13.51□□□□□ -0.25
SVIP-205ENST00000533774 LIG1P18858 919 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 FSTL4Q6MZW2 842 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 KIAA1211LQ6NV74 962 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 C1orf228Q6PIY5 440 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 ALKAL1Q6UXT8 129 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 UROC1Q96N76 676 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 AFF4Q9UHB7 1163 aaKnown RBP13.51□□□□□ -0.25
SVIP-205ENST00000533774 PLXNB3Q9ULL4 1909 aa13.51□□□□□ -0.25
SVIP-205ENST00000533774 CCDC194A0A1B0GVG4 234 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 BCLAF3A2AJT9 711 aaKnown RBP13.5□□□□□ -0.25
SVIP-205ENST00000533774 ACKR2O00590 384 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 PODXLO00592 558 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 CDX4O14627 284 aaPredicted RBP13.5□□□□□ -0.25
SVIP-205ENST00000533774 AKAP3O75969 853 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 ZIC2O95409 532 aaPredicted RBP13.5□□□□□ -0.25
SVIP-205ENST00000533774 DEXIO95424 95 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 PRAMEF12O95522 483 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 TOB2Q14106 344 aaPredicted RBP13.5□□□□□ -0.25
SVIP-205ENST00000533774 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 GALNT17Q6IS24 598 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 PIK3AP1Q6ZUJ8 805 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 GAREM2Q75VX8 874 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 ZBTB8OSQ8IWT0 167 aa13.5□□□□□ -0.25
SVIP-205ENST00000533774 ELMOD1Q8N336 334 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms