RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NOP9Q86U38 636 aaKnown RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 SCFD2Q8WU76 684 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 IRX2Q9BZI1 471 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 RPAP3Q9H6T3 665 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 XPO7Q9UIA9 1087 aaKnown RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 GRID1Q9ULK0 1009 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 FHOD1Q9Y613 1164 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 CDY2AQ9Y6F7 541 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 CDY1Q9Y6F8 540 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 LMTK2Q8IWU2 1503 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 CCT8L1PA6NM43 557 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 GOLGA8TH3BQL2 631 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 DEAF1O75398 565 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 APOA4P06727 396 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 MAGEA4P43358 317 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 SULT1E1P49888 294 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 NPEPPSP55786 919 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 VEPH1Q14D04 833 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 RBBP7Q16576 425 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 GJC2Q5T442 439 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 MOXD1Q6UVY6 613 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 RAB42Q8N4Z0 105 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 PDCD6IPQ8WUM4 868 aaKnown RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 KCNB2Q92953 911 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 MS4A14Q96JA4 679 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 DACH2Q96NX9 599 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 FAM167BQ9BTA0 163 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 CCDC90BQ9GZT6 254 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 GTF3C4Q9UKN8 822 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 PCDHB8Q9UN66 801 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF711Q9Y462 761 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 IGSF9BQ9UPX0 1349 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 FAM196BA6NMK8 535 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 BNIP3LO60238 219 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 EFCAB14O75071 495 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 NDUFB10O96000 172 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 ATICP31939 592 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 IRAK1P51617 712 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 AASDHQ4L235 1098 aaPredicted RBP7.35□□□□□ -1.23
CTNND1-236ENST00000533667 LONP2Q86WA8 852 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 ANKMY2Q8IV38 441 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 ZNF555Q8NEP9 628 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 APPL2Q8NEU8 664 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 SEPT1Q8WYJ6 367 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 CYFIP2Q96F07 1278 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 RAB6BQ9NRW1 208 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 TJP2Q9UDY2 1190 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 MAD2L2Q9UI95 211 aa7.35□□□□□ -1.23
CTNND1-236ENST00000533667 UBA6A0AVT1 1052 aaPredicted RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 GAS2O43903 313 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 EXTL3O43909 919 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 KDM1AO60341 852 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SUPT3HO75486 399 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ENO1P06733 434 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 FDPSP14324 419 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 HSPA13P48723 471 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 MRPS35P82673 323 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SKOR1P84550 965 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PTK7Q13308 1070 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TMEM132DQ14C87 1099 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 KDM7AQ6ZMT4 941 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PPIL6Q8IXY8 311 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 STX19Q8N4C7 294 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 B4GALNT2Q8NHY0 566 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ZIM3Q96PE6 472 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TMEM117Q9H0C3 514 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ABCF3Q9NUQ8 709 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 AIPL1Q9NZN9 384 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ALG6Q9Y672 507 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TNPO2O14787 897 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PSTPIP1O43586 416 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ATP9BO43861 1147 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SYF2O95926 243 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 POLBP06746 335 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 APRTP07741 180 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 MSL3P1P0C860 447 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 CYP2C8P10632 490 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PDHBP11177 359 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 COMTP21964 271 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ALDH18A1P54886 795 aaKnown RBP7.34□□□□□ -1.23
CTNND1-236ENST00000533667 KCNA1Q09470 495 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 KRT72Q14CN4 511 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 PTGISQ16647 500 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 LONRF1Q17RB8 773 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 CCNJLQ8IV13 435 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 SAMD3Q8N6K7 520 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TBC1D16Q8TBP0 767 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 RUBCNLQ9H714 662 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 AGAP1Q9UPQ3 857 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 NPHP3-ACAD11A0A0J9YXS1 232 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 TMEM120BA0PK00 339 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 ENO4A6NNW6 628 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 MYL2P10916 166 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 RASA1P20936 1047 aa7.34□□□□□ -1.23
CTNND1-236ENST00000533667 STIP1P31948 543 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms