RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
COMMD9-208ENST00000533643 NUB1Q9Y5A7 615 aa12.81□□□□□ -0.36
COMMD9-208ENST00000533643 TDRD15B5MCY1 1934 aaKnown RBP12.81□□□□□ -0.36
COMMD9-208ENST00000533643 CHD9Q3L8U1 2897 aa12.81□□□□□ -0.36
COMMD9-208ENST00000533643 A0A1W2PPC1 479 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 KPNA7A9QM74 516 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 I3L4J1 428 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 TADA2AO75478 443 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 EFEMP2O95967 443 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 PAX3P23760 479 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 BMPR1AP36894 532 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 PBX1P40424 430 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 BRCC3P46736 316 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
COMMD9-208ENST00000533643 ZNF75DP51815 510 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 NOP14P78316 857 aaKnown RBP12.8□□□□□ -0.36
COMMD9-208ENST00000533643 SMAD3P84022 425 aaKnown RBP12.8□□□□□ -0.36
COMMD9-208ENST00000533643 TAP1Q03518 808 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 LRMPQ12912 555 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 GSE1Q14687 1217 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 RAB30Q15771 203 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 TIGD5Q53EQ6 642 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 TRIM65Q6PJ69 517 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 SPRED2Q7Z698 418 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 LSM14BQ9BX40 385 aaKnown RBP12.8□□□□□ -0.36
COMMD9-208ENST00000533643 IMPG2Q9BZV3 1241 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 GRPEL1Q9HAV7 217 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
COMMD9-208ENST00000533643 ADAM28Q9UKQ2 775 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 POLIQ9UNA4 740 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 PCDHB12Q9Y5F1 795 aa12.8□□□□□ -0.36
COMMD9-208ENST00000533643 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 CYB561D2O14569 222 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 TPM3P06753 285 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 ERVK-21P61565 698 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 WDR72Q3MJ13 1102 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 ZNF667Q5HYK9 610 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 KLHDC7AQ5VTJ3 777 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
COMMD9-208ENST00000533643 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 LIMS2Q7Z4I7 341 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 ARHGEF19Q8IW93 802 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 SENP8Q96LD8 212 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 NT5C1BQ96P26 610 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 GPR62Q9BZJ7 368 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
COMMD9-208ENST00000533643 M0QZQ0 153 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 TRAPPC3O43617 180 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 FGF18O76093 207 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 NOL4O94818 638 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 CLSTN1O94985 981 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 CTNNB1P35222 781 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 PPM1AP35813 382 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 TNNC1P63316 161 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 SOWAHAQ2M3V2 549 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 GJB7Q6PEY0 223 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 DSTYKQ6XUX3 929 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 TAS1R1Q7RTX1 841 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 KLHL23Q8NBE8 558 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-208ENST00000533643 KREMEN1Q96MU8 473 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 TGS1Q96RS0 853 aaKnown RBP12.78□□□□□ -0.36
COMMD9-208ENST00000533643 PLVAPQ9BX97 442 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 NIF3L1Q9GZT8 377 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 GANQ9H2C0 597 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 UBE2TQ9NPD8 197 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-208ENST00000533643 FAM207AQ9NSI2 230 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-208ENST00000533643 APEX2Q9UBZ4 518 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
COMMD9-208ENST00000533643 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 RWDD3Q9Y3V2 267 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 SCN1AP35498 2009 aa12.78□□□□□ -0.36
COMMD9-208ENST00000533643 C5orf67F2Z3F1 127 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 EPHB6O15197 1021 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 RB1P06400 928 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 WEE2P0C1S8 567 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 P4HA1P13674 534 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 DNAJB2P25686 324 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 ASPAP45381 313 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 RAP1GAPP47736 663 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 CDH8P55286 799 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 ELAVL2Q12926 359 aaKnown RBP12.77□□□□□ -0.37
COMMD9-208ENST00000533643 CUL2Q13617 745 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
COMMD9-208ENST00000533643 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms