RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 SNTNA6NMZ2 147 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 FOXP2O15409 715 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.09
CSRP1-218ENST00000533402 SLC9A1P19634 815 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 PSMC2P35998 433 aaKnown RBP8.21□□□□□ -1.09
CSRP1-218ENST00000533402 ATG14Q6ZNE5 492 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 TPH2Q8IWU9 490 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 HPS1Q92902 700 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 TMEM79Q9BSE2 394 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 DHX36Q9H2U1 1008 aaKnown RBP8.21□□□□□ -1.09
CSRP1-218ENST00000533402 ARMT1Q9H993 441 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 ZDHHC9Q9Y397 364 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 GGPS1O95749 300 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 MSL3P1P0C860 447 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 GPS1Q13098 491 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 STX12Q86Y82 276 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 SLFN12Q8IYM2 578 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 C4orf33Q8N1A6 199 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 RMND5BQ96G75 393 aaPredicted RBP8.21□□□□□ -1.09
CSRP1-218ENST00000533402 PPP1R36Q96LQ0 422 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 PCDHA12Q9UN75 941 aa8.21□□□□□ -1.09
CSRP1-218ENST00000533402 SMIM31A0A1B0GVY4 71 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 A8MXQ7 604 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 PSMD14O00487 310 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 RPS6KA5O75582 802 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 S100A6P06703 90 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SRGAP2CP0DJJ0 459 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SCRN3Q0VDG4 424 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 DMP1Q13316 513 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SYCP2LQ5T4T6 812 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 MMGT1Q8N4V1 131 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 LARP4BQ92615 738 aaKnown RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 NT5C1BQ96P26 610 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 CCDC59Q9P031 241 aaKnown RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 STAP2Q9UGK3 403 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 TRIM13O60858 407 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 POLR2MP0CAP2 368 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 IFNA8P32881 189 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 IFRD2Q12894 506 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 DENND6AQ8IWF6 608 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 NUP93Q8N1F7 819 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 RYBPQ8N488 228 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ANKRD36BP1Q96IX9 119 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SUGT1Q9Y2Z0 365 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 CHD2O14647 1828 aaKnown RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 CENPXA8MT69 81 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ABLIM1O14639 778 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 PDE9AO76083 593 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ZBED1O96006 694 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 TRAF2Q12933 501 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 LAMC2Q13753 1193 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 UBE3CQ15386 1083 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 VPS72Q15906 364 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ERFEQ4G0M1 354 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 OLFM1Q99784 485 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 APOL4Q9BPW4 351 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SPRTNQ9H040 489 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ISCUQ9H1K1 167 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 ARHGEF3Q9NR81 526 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 RNF103O00237 685 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 SNX2O60749 519 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 IMPDH2P12268 514 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 LRRC63Q05C16 580 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 PRCCQ92733 491 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 MAP4K1Q92918 833 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 MLPHQ9BV36 600 aaPredicted RBP8.21□□□□□ -1.1
CSRP1-218ENST00000533402 MANSC1Q9H8J5 431 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 TIMMDC1Q9NPL8 285 aa8.21□□□□□ -1.1
CSRP1-218ENST00000533402 MYH7P12883 1935 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ARPC4-TTLL3A0A0A6YYG9 625 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ALOX12P18054 663 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 CCNCP24863 283 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SARSP49591 514 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PTPN12Q05209 780 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 COG2Q14746 738 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RC3H1Q5TC82 1133 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 C6orf62Q9GZU0 229 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 MAP3K20Q9NYL2 800 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 HEY2Q9UBP5 337 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF212Q9UDV6 495 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PHTF1Q9UMS5 762 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ZNF862O60290 1169 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RCAN1P53805 252 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 TRIM28Q13263 835 aaKnown RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 P3H2Q8IVL5 708 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 PEX5LQ8IYB4 626 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RIBC1Q8N443 379 aaPredicted RBP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RAB42Q8N4Z0 105 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.2□□□□□ -1.1
CSRP1-218ENST00000533402 FANCBQ8NB91 859 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 EXT2Q93063 718 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 JMJD4Q9H9V9 463 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 MYH2Q9UKX2 1941 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 LAD1O00515 517 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 RAD51CO43502 376 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 SASH3O75995 380 aa8.2□□□□□ -1.1
CSRP1-218ENST00000533402 KLHL18O94889 574 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms