RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 OR1D2P34982 312 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 PNPLA4P41247 253 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 ENPEPQ07075 957 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 SPAG1Q07617 926 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 STK4Q13043 487 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 HS2ST1Q7LGA3 356 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 PALB2Q86YC2 1186 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 LRRC52Q8N7C0 313 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 FSIP1Q8NA03 581 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 SPATA20Q8TB22 786 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 FAM213AQ9BRX8 229 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 LRFN3Q9BTN0 628 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 KCTD10Q9H3F6 313 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 GOLPH3LQ9H4A5 285 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 POMKQ9H5K3 350 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 SLC39A2Q9NP94 309 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 AVENQ9NQS1 362 aaPredicted RBP10.65□□□□□ -0.7
NUP98-220ENST00000533346 DMAC2Q9NW81 257 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 RBAKQ9NYW8 714 aaPredicted RBP10.65□□□□□ -0.7
NUP98-220ENST00000533346 HSPBP1Q9NZL4 362 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 FBXL5Q9UKA1 691 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 TRAF3IP3Q9Y228 551 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 CDY1Q9Y6F8 540 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
NUP98-220ENST00000533346 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 C5orf42Q9H799 3197 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 OR6C75A6NL08 312 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 MAPK13O15264 365 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 ADAM12O43184 909 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 GPR37L1O60883 481 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 PRPF40AO75400 957 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 RPN1P04843 607 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 FAM163BP0C2L3 166 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 RPL17P18621 184 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 TAF6P49848 677 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 WNT7BP56706 349 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 CLDN10P78369 228 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 ROR1Q01973 937 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 YWHAHQ04917 246 aaPredicted RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 RARS2Q5T160 578 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 ZNF280DQ6N043 979 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 CCDC149Q6ZUS6 474 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 DPH6Q7L8W6 267 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 LIMS2Q7Z4I7 341 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 RNF135Q8IUD6 432 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 WDR49Q8IV35 697 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 TCEAL8Q8IYN2 117 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 GRAMD1CQ8IYS0 662 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 C12orf76Q8N812 135 aaPredicted RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 XXYLT1Q8NBI6 393 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 ZSWIM2Q8NEG5 633 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 MFSD14AQ96MC6 490 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 C1QTNF1Q9BXJ1 281 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 GTPBP4Q9BZE4 634 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 INTS13Q9NVM9 706 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 GDAP2Q9NXN4 497 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 AFF4Q9UHB7 1163 aaKnown RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 ITGA11Q9UKX5 1188 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 DSEQ9UL01 958 aa10.64□□□□□ -0.71
NUP98-220ENST00000533346 ZFP37Q9Y6Q3 630 aaPredicted RBP10.64□□□□□ -0.71
NUP98-220ENST00000533346 DOCK6Q96HP0 2047 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 WDR27A2RRH5 827 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 KPNA7A9QM74 516 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 I3L4J1 428 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 PPEF2O14830 753 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 SPTLC1O15269 473 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 DCXO43602 365 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 STAU1O95793 577 aaKnown RBP10.63□□□□□ -0.71
NUP98-220ENST00000533346 FAM160A1Q05DH4 1040 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 SMARCB1Q12824 385 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 GPR17Q13304 367 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 PSMD6Q15008 389 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 SNRNP35Q16560 246 aaKnown RBP10.63□□□□□ -0.71
NUP98-220ENST00000533346 SV2CQ496J9 727 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 CTXN3Q4LDR2 81 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 OTOP3Q7RTS5 596 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
NUP98-220ENST00000533346 C1orf127Q8N9H9 656 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 NXPE3Q969Y0 559 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 FAM212AQ96EL1 285 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 SAAL1Q96ER3 474 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 ZNF560Q96MR9 790 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 GSDMAQ96QA5 445 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 PCIF1Q9H4Z3 704 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 C11orf16Q9NQ32 467 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 EXOC1Q9NV70 894 aa10.63□□□□□ -0.71
NUP98-220ENST00000533346 RFPL2O75678 378 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 MICAL2O94851 1124 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 C8AP07357 584 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 ODC1P11926 461 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 SSTR3P32745 418 aaPredicted RBP10.62□□□□□ -0.71
NUP98-220ENST00000533346 GUCY2FP51841 1108 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 AP3M2P53677 418 aa10.62□□□□□ -0.71
NUP98-220ENST00000533346 RBP5P82980 135 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms