RNA–Protein interactions for RNA: ENST00000533325.5

ATG13-221, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-221ENST00000533325 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 KPNA7A9QM74 516 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 NT5C1B-RDH14C9J2C7 533 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 AP5Z1O43299 807 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 KIF4AO95239 1232 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 MYOGP15173 224 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 PPM1AP35813 382 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 MRE11P49959 708 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 ZNF75DP51815 510 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 TNNC1P63316 161 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 KCNMA1Q12791 1236 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 ELAVL2Q12926 359 aaKnown RBP13.8□□□□□ -0.2
ATG13-221ENST00000533325 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 SCARA3Q6AZY7 606 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 FAXDC2Q96IV6 333 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 FAM81BQ96LP2 452 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 SAMD11Q96NU1 681 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 LSM14BQ9BX40 385 aaKnown RBP13.8□□□□□ -0.2
ATG13-221ENST00000533325 PLCB1Q9NQ66 1216 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.25e-9■■■■■ 167.7
ATG13-221ENST00000533325 GDAP2Q9NXN4 497 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 NXF1Q9UBU9 619 aaKnown RBP13.8□□□□□ -0.2
ATG13-221ENST00000533325 SIK3Q9Y2K2 1263 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 CUL9Q8IWT3 2517 aa13.8□□□□□ -0.2
ATG13-221ENST00000533325 HUS1O60921 280 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 LRRN2O75325 713 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 CA3P07451 260 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
ATG13-221ENST00000533325 BMPR1AP36894 532 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 PBX3P40426 434 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
ATG13-221ENST00000533325 LRMPQ12912 555 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 SPOPLQ6IQ16 392 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 CD300LGQ6UXG3 332 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 TATDN2Q93075 761 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 MRFAP1L1Q96HT8 127 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 IGSF21Q96ID5 467 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 SENP8Q96LD8 212 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 PLVAPQ9BX97 442 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 PBX4Q9BYU1 374 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
ATG13-221ENST00000533325 MARCH5Q9NX47 278 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 YBX2Q9Y2T7 364 aaKnown RBP13.79□□□□□ -0.2
ATG13-221ENST00000533325 DAAM1Q9Y4D1 1078 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 SNX9Q9Y5X1 595 aa13.79□□□□□ -0.2
ATG13-221ENST00000533325 PLXNA4Q9HCM2 1894 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 VWA8A3KMH1 1905 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 F8W810 466 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 CYB561D2O14569 222 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 SPTLC1O15269 473 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 ITGB1P05556 798 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 RB1P06400 928 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 FAM163BP0C2L3 166 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 RFX1P22670 979 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 CTNNB1P35222 781 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 PBX1P40424 430 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 PBX2P40425 430 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 BRCC3P46736 316 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 SMAD3P84022 425 aaKnown RBP13.78□□□□□ -0.2
ATG13-221ENST00000533325 KRT17Q04695 432 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 TIGD5Q53EQ6 642 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 KLHDC7AQ5VTJ3 777 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 FUT10Q6P4F1 479 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 ENOSF1Q7L5Y1 443 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 TOP6BLQ8N6T0 577 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 APPL2Q8NEU8 664 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 ELMO3Q96BJ8 720 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 SUSD3Q96L08 255 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 TGS1Q96RS0 853 aaKnown RBP13.78□□□□□ -0.2
ATG13-221ENST00000533325 MMS19Q96T76 1030 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 NKX2-4Q9H2Z4 354 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 SIX2Q9NPC8 291 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 UBE2TQ9NPD8 197 aaPredicted RBP13.78□□□□□ -0.2
ATG13-221ENST00000533325 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
ATG13-221ENST00000533325 APEX2Q9UBZ4 518 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 STK39Q9UEW8 545 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 PCDHB8Q9UN66 801 aa13.78□□□□□ -0.2
ATG13-221ENST00000533325 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■■■ 102.6
ATG13-221ENST00000533325 M0QZQ0 153 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 ADCY5O95622 1261 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 LINC00271P0C7V0 271 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 ODC1P11926 461 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 IGFBP6P24592 240 aaPredicted RBP13.77□□□□□ -0.21
ATG13-221ENST00000533325 KLK7P49862 253 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 MFAP3P55082 362 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 ERVK-21P61565 698 aa13.77□□□□□ -0.21
ATG13-221ENST00000533325 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
ATG13-221ENST00000533325 GCNT1Q02742 428 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms