RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SLC15A2Q16348 729 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 FAM153CQ494X1 144 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 MMEL1Q495T6 779 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.9□□□□□ -0.35
BDNF-218ENST00000533246 FIGNQ5HY92 759 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 GPAT2Q6NUI2 795 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 ARMCX2Q7L311 632 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 DRAXINQ8NBI3 349 aaPredicted RBP12.9□□□□□ -0.35
BDNF-218ENST00000533246 HDAC11Q96DB2 347 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 GLIS2Q9BZE0 524 aaPredicted RBP12.9□□□□□ -0.35
BDNF-218ENST00000533246 KLC2Q9H0B6 622 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 FAM153AQ9UHL3 310 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 CFAP69A5D8W1 941 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 SH3BP5O60239 455 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 ROR2Q01974 943 aaKnown RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 BYSLQ13895 437 aaKnown RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 CERKQ8TCT0 537 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 SKA2Q8WVK7 121 aaPredicted RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 TATDN2Q93075 761 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 CYFIP2Q96F07 1278 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 CCDC68Q9H2F9 335 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 MAPK13O15264 365 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 CST8O60676 142 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 PHF2O75151 1096 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 MOCS2O96007 188 aaPredicted RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 KRT7P08729 469 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 FAXCQ5TGI0 409 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 WDR59Q6PJI9 974 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 SV2AQ7L0J3 742 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 ENOSF1Q7L5Y1 443 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 CEP70Q8NHQ1 597 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 SLC35C1Q96A29 364 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 NR1H4Q96RI1 486 aaPredicted RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 TMEM8AQ9HCN3 771 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 RAB6BQ9NRW1 208 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 MARCOQ9UEW3 520 aaPredicted RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 IQANK1A0A1B0GTG1 560 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 ICAM1P05362 532 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 RFX1P22670 979 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 C1orf131Q8NDD1 294 aaKnown RBP12.89□□□□□ -0.35
BDNF-218ENST00000533246 LRRC37BQ96QE4 947 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 FGFR1OP2Q9NVK5 253 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 STRIP2Q9ULQ0 834 aa12.89□□□□□ -0.35
BDNF-218ENST00000533246 ADAMTS3O15072 1205 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
BDNF-218ENST00000533246 ANP32DO95626 131 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 HIF1AQ16665 826 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 AMHR2Q16671 573 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 GLRA4Q5JXX5 417 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 TMCO4Q5TGY1 634 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 WDR93Q6P2C0 686 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
BDNF-218ENST00000533246 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 F8VZ95 297 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 RTN3O95197 1032 aaPredicted RBP12.88□□□□□ -0.35
BDNF-218ENST00000533246 ITGA8P53708 1063 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 AP1B1Q10567 949 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 ZNF280DQ6N043 979 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 TRIM55Q9BYV6 548 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 EPN3Q9H201 632 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 PPP1R9AQ9ULJ8 1098 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 NEU2Q9Y3R4 380 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 FAM237AA0A1B0GTK4 181 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 FAM200BP0CF97 657 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 CLCN3P51790 818 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 NLRP11P59045 1033 aaKnown RBP12.88□□□□□ -0.35
BDNF-218ENST00000533246 PID1Q7Z2X4 250 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 ANKRD23Q86SG2 305 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 SIX5Q8N196 739 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
BDNF-218ENST00000533246 RNF139Q8WU17 664 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 HIC2Q96JB3 615 aa12.88□□□□□ -0.35
BDNF-218ENST00000533246 TMEM120BA0PK00 339 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 GYG2O15488 501 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 AHCYL1O43865 530 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CTSHP09668 335 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 RBP3P10745 1247 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 EPHB1P54762 984 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 TSTA3Q13630 321 aaPredicted RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 OTOP1Q7RTM1 612 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 IRF2BP1Q8IU81 584 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 TTC13Q8NBP0 860 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
BDNF-218ENST00000533246 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
BDNF-218ENST00000533246 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 PDCD2LQ9BRP1 358 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 NUF2Q9BZD4 464 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CARD9Q9H257 536 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
BDNF-218ENST00000533246 KCNN4O15554 427 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms