RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 P3H1Q32P28 736 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 CCDC137Q6PK04 289 aaKnown RBP15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 RCOR2Q8IZ40 523 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 KRT35Q92764 455 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 SLITRK1Q96PX8 696 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 PRG3Q9Y2Y8 225 aaPredicted RBP15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 PDHXO00330 501 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 RHOBTB3O94955 611 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 SOX10P56693 466 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 UGP2Q16851 508 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 PTF1AQ7RTS3 328 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ZBED8Q8IZ13 594 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 BHMTQ93088 406 aa15.54■□□□□ 0.08
PCDHA9-202ENST00000532602 ATP5HO75947 161 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 GCLCP48506 637 aaPredicted RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 EIF3EP60228 445 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 MAPRE1Q15691 268 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 ANKMY2Q8IV38 441 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 MFN1Q8IWA4 741 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 TMEM117Q9H0C3 514 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 CFAP69A5D8W1 941 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 KCNN4O15554 427 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 IL1R1P14778 569 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC30A10Q6XR72 485 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 LCA5Q86VQ0 697 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 ATPAF2Q8N5M1 289 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 HASPINQ8TF76 798 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 ADAM33Q9BZ11 813 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 CSDE1O75534 798 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 KCNA4P22459 653 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 YY1P25490 414 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 RPA1P27694 616 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 ARHGAP15Q53QZ3 475 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 CASS4Q9NQ75 786 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 ADGRG1Q9Y653 693 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 BCL9O00512 1426 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 MAP4P27816 1152 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 TROAPQ12815 778 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 FASTKD1Q53R41 847 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 IZUMO3Q5VZ72 239 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 SYDE1Q6ZW31 735 aaPredicted RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 OTUB1Q96FW1 271 aaPredicted RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 NDE1Q9NXR1 346 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 FXR2P51116 673 aaKnown RBP eCLIP15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 KCNA1Q09470 495 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 SYTL3Q4VX76 610 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 PXMP2Q9NR77 195 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 INTUQ9ULD6 942 aa15.53■□□□□ 0.08
PCDHA9-202ENST00000532602 EXTL3O43909 919 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 ALDH1A3P47895 512 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 DDR1Q08345 913 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 SENP7Q9BQF6 1050 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 C17orf75Q9HAS0 396 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC30A1Q9Y6M5 507 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 SLC4A7Q9Y6M7 1214 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 PNMA6AP0CW24 399 aaPredicted RBP15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 ARHGEF7Q14155 803 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 ATL2Q8NHH9 583 aa15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
PCDHA9-202ENST00000532602 KCNA2P16389 499 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 PIGHQ14442 188 aaPredicted RBP15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 ARHGAP18Q8N392 663 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 CXorf38Q8TB03 319 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC13A1Q9BZW2 595 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 COG4Q9H9E3 785 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 DOLKQ9UPQ8 538 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 CFAP99D6REC4 459 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 EIF3DO15371 548 aaKnown RBP eCLIP15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 TRPA1O75762 1119 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 ATICP31939 592 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 GTF2H1P32780 548 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 ARL4DP49703 201 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 ARSEP51690 589 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 MKNK1Q9BUB5 465 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 POLR3CQ9BUI4 534 aaPredicted RBP15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 UCHL3P15374 230 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 MAPRE2Q15555 327 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 SMTNL2Q2TAL5 461 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 XAB2Q9HCS7 855 aaKnown RBP15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 TBX20Q9UMR3 447 aa15.52■□□□□ 0.07
PCDHA9-202ENST00000532602 CASP4P49662 377 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 HOXA2O43364 376 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 RALBP11234 206 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 NUDCD3Q8IVD9 361 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 SAMD3Q8N6K7 520 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 SLC7A14Q8TBB6 771 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 TMEM169Q96HH4 297 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 COLEC11Q9BWP8 271 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 CATSPERBQ9H7T0 1116 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 EML4Q9HC35 981 aaKnown RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 DDX4Q9NQI0 724 aaKnown RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 ABI2Q9NYB9 513 aaPredicted RBP15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 SENP1Q9P0U3 644 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 DCDC2CA8MYV0 355 aa15.51■□□□□ 0.07
PCDHA9-202ENST00000532602 WNT10BO00744 389 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms