RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 C4orf19Q8IY42 314 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 HASPINQ8TF76 798 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 AGPAT1Q99943 283 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 HACD3Q9P035 362 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 E2F5Q15329 346 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 SPDL1Q96EA4 605 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 GPRC5CQ9NQ84 441 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 TRPM5Q9NZQ8 1165 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 FBXL21Q9UKT6 434 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 PLAAQ9Y263 795 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTPRK-221ENST00000532331 COPEO14579 308 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 APOL1O14791 398 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 FOXN1O15353 648 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 TEX33O43247 280 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 SLC11A2P49281 568 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 ARL4DP49703 201 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 IL1RL1Q01638 556 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 NSUN2Q08J23 767 aaKnown RBP eCLIP11.9□□□□□ -0.51
PTPRK-221ENST00000532331 PLD1Q13393 1074 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 SLC7A14Q8TBB6 771 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 PPWD1Q96BP3 646 aaKnown RBP11.9□□□□□ -0.51
PTPRK-221ENST00000532331 KLRG1Q96E93 195 aa11.9□□□□□ -0.51
PTPRK-221ENST00000532331 SARS2Q9NP81 518 aaKnown RBP11.9□□□□□ -0.51
PTPRK-221ENST00000532331 GRID2IPA4D2P6 1211 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 NCF2P19878 526 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 PRAMEP78395 509 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ART3Q13508 389 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 EDRF1Q3B7T1 1238 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 PDXDC1Q6P996 788 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 DHX40Q8IX18 779 aaKnown RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 PDCD7Q8N8D1 485 aaKnown RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CD99L2Q8TCZ2 262 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 FBXO32Q969P5 355 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 POMCP01189 267 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CDH18Q13634 790 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ANO4Q32M45 955 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ASAP3Q8TDY4 903 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 EXT2Q93063 718 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 RHOBTB3O94955 611 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 HSPA4LO95757 839 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 MYL4P12829 197 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 TAL1P17542 331 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 YWHAHQ04917 246 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-221ENST00000532331 AMHR2Q16671 573 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 KLHL38Q2WGJ6 581 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CDC26Q8NHZ8 85 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CASTOR2A6NHX0 329 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CHRNA3P32297 505 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ROR1Q01973 937 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 SPARCL1Q14515 664 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 SEZ6Q53EL9 994 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 CRLF3Q8IUI8 442 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ATP6V0D2Q8N8Y2 350 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 FGD4Q96M96 766 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 ORC6Q9Y5N6 252 aa11.89□□□□□ -0.51
PTPRK-221ENST00000532331 SNX2O60749 519 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 SEC23AQ15436 765 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 RFFLQ8WZ73 363 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 OSBPL9Q96SU4 736 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.88□□□□□ -0.511e-6■□□□□ 8.7
PTPRK-221ENST00000532331 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CATSPERBQ9H7T0 1116 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CYP4F11Q9HBI6 524 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 PCDHAC2Q9Y5I4 1007 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 H0Y626 953 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CA12O43570 354 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 XYLBO75191 536 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 AP1G2O75843 785 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 NCAM1P13591 858 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 AXLP30530 894 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 NPTX2P47972 431 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 ATPAF2Q8N5M1 289 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 MAML1Q92585 1016 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 THG1LQ9NWX6 298 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 MAP3K13O43283 966 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 DNAJC6O75061 913 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 NIPA1Q7RTP0 329 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 METTL16Q86W50 562 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 MKNK1Q9BUB5 465 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 CAPN11Q9UMQ6 739 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 ADGRG1Q9Y653 693 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 F5H423 210 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 RTN2O75298 545 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 LGALS2P05162 132 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 SLC2A3P11169 496 aa11.88□□□□□ -0.51
PTPRK-221ENST00000532331 RFC1P35251 1148 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
PTPRK-221ENST00000532331 DCAF6Q58WW2 860 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms