RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CTTNBP2NLQ9P2B4 639 aa6.22□□□□□ -1.41
PTPRK-220ENST00000531466 SSBP2P81877 361 aaPredicted RBP6.21□□□□□ -1.42
PTPRK-220ENST00000531466 MC2RQ01718 297 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 TFF2Q03403 129 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 DYRK1AQ13627 763 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 FAM153CQ494X1 144 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 C11orf87Q6NUJ2 197 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 JAZF1Q86VZ6 243 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 ADGRG5Q8IZF4 528 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 DCBLD1Q8N8Z6 715 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 NSUN7Q8NE18 718 aaKnown RBP6.21□□□□□ -1.42
PTPRK-220ENST00000531466 NLGN4YQ8NFZ3 816 aaPredicted RBP6.21□□□□□ -1.42
PTPRK-220ENST00000531466 PADI4Q9UM07 663 aa6.21□□□□□ -1.42
PTPRK-220ENST00000531466 VWC2LB2RUY7 222 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 BMP15O95972 392 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 HNRNPMP52272 730 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRK-220ENST00000531466 SLC5A3P53794 718 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 ZNF844Q08AG5 666 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 ETFDHQ16134 617 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 UTP14CQ5TAP6 766 aaKnown RBP6.2□□□□□ -1.42
PTPRK-220ENST00000531466 RNF180Q86T96 592 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 SEMA6DQ8NFY4 1073 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 UBXN4Q92575 508 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 DPF2Q92785 391 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 RAB24Q969Q5 203 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 FCRL4Q96PJ5 515 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 C14orf119Q9NWQ9 140 aa6.2□□□□□ -1.42
PTPRK-220ENST00000531466 SUN1O94901 812 aa6.19□□□□□ -1.42
PTPRK-220ENST00000531466 PTGER1P34995 402 aa6.19□□□□□ -1.42
PTPRK-220ENST00000531466 ATP2B3Q16720 1220 aa6.19□□□□□ -1.42
PTPRK-220ENST00000531466 B3GALNT2Q8NCR0 500 aa6.19□□□□□ -1.42
PTPRK-220ENST00000531466 SNX19Q92543 992 aa6.19□□□□□ -1.42
PTPRK-220ENST00000531466 CCM2LQ9NUG4 571 aaPredicted RBP6.19□□□□□ -1.42
PTPRK-220ENST00000531466 TOR1BO14657 336 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 GRM6O15303 877 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 SBK3P0C264 359 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 HOXB6P17509 224 aaKnown RBP6.18□□□□□ -1.42
PTPRK-220ENST00000531466 KELP23276 732 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 GPR3P46089 330 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 ANXA11P50995 505 aaKnown RBP6.18□□□□□ -1.42
PTPRK-220ENST00000531466 CTXN1P60606 82 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 RHOT1Q8IXI2 618 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 CAMKK1Q8N5S9 505 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 ZNF48Q96MX3 618 aaPredicted RBP6.18□□□□□ -1.42
PTPRK-220ENST00000531466 KLHL32Q96NJ5 620 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 SLC2A13Q96QE2 648 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 C7orf25Q9BPX7 421 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 NEU2Q9Y3R4 380 aa6.18□□□□□ -1.42
PTPRK-220ENST00000531466 WDR27A2RRH5 827 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 GCOM1H8Y6P7 765 aaPredicted RBP6.17□□□□□ -1.42
PTPRK-220ENST00000531466 KCNAB3O43448 404 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 URI1O94763 535 aaPredicted RBP6.17□□□□□ -1.42
PTPRK-220ENST00000531466 MTNR1BP49286 362 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
PTPRK-220ENST00000531466 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 FBXO41Q8TF61 875 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 RPL36ALQ969Q0 106 aaKnown RBP6.17□□□□□ -1.42
PTPRK-220ENST00000531466 SERGEFQ9UGK8 458 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 NR2E3Q9Y5X4 410 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 ZNF521Q96K83 1311 aa6.17□□□□□ -1.42
PTPRK-220ENST00000531466 CCDC195A0A1B0GUA6 201 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 TTLL1O95922 423 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 RHOP08100 348 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 WASF1Q92558 559 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 LRIG1Q96JA1 1093 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 KLC4Q9NSK0 619 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 ADGRA2Q96PE1 1338 aa6.16□□□□□ -1.42
PTPRK-220ENST00000531466 HNRNPCP07910 306 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTPRK-220ENST00000531466 NR2F6P10588 404 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 MTHFD1P11586 935 aaKnown RBP6.15□□□□□ -1.42
PTPRK-220ENST00000531466 POU3F3P20264 500 aaPredicted RBP6.15□□□□□ -1.42
PTPRK-220ENST00000531466 DRD4P21917 467 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 EPHB2P29323 1055 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 NXPH1P58417 271 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 TUBA4AP68366 448 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 ITIH3Q06033 890 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 ZNF66Q6ZN08 573 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 CFAP52Q8N1V2 620 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 NRG4Q8WWG1 115 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 TMX3Q96JJ7 454 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 IMPG2Q9BZV3 1241 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 NRIP3Q9NQ35 241 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 INTUQ9ULD6 942 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 SLC45A2Q9UMX9 530 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 BTBD3Q9Y2F9 522 aa6.15□□□□□ -1.42
PTPRK-220ENST00000531466 TRIM38O00635 465 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 EBLN1P0CF75 366 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 MPGP29372 298 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 TMPRSS15P98073 1019 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 TARDBPQ13148 414 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRK-220ENST00000531466 FLYWCH1Q4VC44 716 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 PABPC1LQ4VXU2 614 aaKnown RBP6.14□□□□□ -1.43
PTPRK-220ENST00000531466 YTHDF3Q7Z739 585 aaKnown RBP6.14□□□□□ -1.43
PTPRK-220ENST00000531466 RSPH3Q86UC2 560 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 PPM1NQ8N819 430 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 TMIEQ8NEW7 156 aa6.14□□□□□ -1.43
PTPRK-220ENST00000531466 AHCYL2Q96HN2 611 aaKnown RBP6.14□□□□□ -1.43
PTPRK-220ENST00000531466 PBKQ96KB5 322 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms