RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 ABCB4P21439 1286 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 GNA15P30679 374 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CDH5P33151 784 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 NOMO3P69849 1222 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 RBP5P82980 135 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PTPN11Q06124 597 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF667Q5HYK9 610 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 C11orf63Q6NUN7 778 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PPP1R2P3Q6NXS1 205 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 FAM228AQ86W67 206 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PHF13Q86YI8 300 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 MCOLN2Q8IZK6 566 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 TMEM130Q8N3G9 435 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PCSK9Q8NBP7 692 aaKnown RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF606Q8WXB4 792 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 WNT8BQ93098 351 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 ZMAT2Q96NC0 199 aaKnown RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 ZSWIM1Q9BR11 485 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 SENP6Q9GZR1 1112 aaPredicted RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 SDCBP2Q9H190 292 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CXCL16Q9H2A7 254 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 DPP3Q9NY33 737 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 POLIQ9UNA4 740 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 GINS2Q9Y248 185 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 NOC2LQ9Y3T9 749 aaKnown RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 PDCD11Q14690 1871 aaKnown RBP11.67□□□□□ -0.54
SRPRA-205ENST00000531104 MYH10P35580 1976 aa11.67□□□□□ -0.54
SRPRA-205ENST00000531104 CABYRO75952 493 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 CHRNA1P02708 482 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 CFHP08603 1231 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 PAEPP09466 180 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 MYBL1P10243 752 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 KCNE1P15382 129 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 ZSCAN20P17040 1043 aaPredicted RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 POLR2BP30876 1174 aaKnown RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 PRMT2P55345 433 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 PTP4A2Q12974 167 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 RPS6KA1Q15418 735 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 MON1BQ7L1V2 547 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 RSPH3Q86UC2 560 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 MSANTD4Q8NCY6 345 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 SMG8Q8ND04 991 aaKnown RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 WHAMMQ8TF30 809 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 CYFIP2Q96F07 1278 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 TRIM11Q96F44 468 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 KIF12Q96FN5 646 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 VCPIP1Q96JH7 1222 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 PBKQ96KB5 322 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 SAGE1Q9NXZ1 904 aa11.66□□□□□ -0.54
SRPRA-205ENST00000531104 PIN4Q9Y237 131 aaKnown RBP11.66□□□□□ -0.54
SRPRA-205ENST00000531104 DDX3YO15523 660 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 CILPO75339 1184 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 RECQL4O94761 1208 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 LSM8O95777 96 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 KRT19P08727 400 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 GUCY2FP51841 1108 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 YARSP54577 528 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 RAD23BP54727 409 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 INCA1Q0VD86 236 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 TRIM71Q2Q1W2 868 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 TEX35Q5T0J7 233 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 LHX8Q68G74 356 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 PEX26Q7Z412 305 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 RASGEF1CQ8N431 466 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 MMGT1Q8N4V1 131 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 LRRC52Q8N7C0 313 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 ZNF653Q96CK0 615 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 HPDLQ96IR7 371 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 RPS6KC1Q96S38 1066 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 TSEN34Q9BSV6 310 aaKnown RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 ANKZF1Q9H8Y5 726 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 CHST12Q9NRB3 414 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 AMFRQ9UKV5 643 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 PACSIN2Q9UNF0 486 aaPredicted RBP11.65□□□□□ -0.54
SRPRA-205ENST00000531104 AGAP1Q9UPQ3 857 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 CITO14578 2027 aa11.65□□□□□ -0.54
SRPRA-205ENST00000531104 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 M0QZ92 97 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 THAP12O43422 761 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 FKTNO75072 461 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 P4HA1P13674 534 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CYP3A5P20815 502 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 CXCR5P32302 372 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 ACLYP53396 1101 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 PTK7Q13308 1070 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 WDR72Q3MJ13 1102 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
SRPRA-205ENST00000531104 LIMS2Q7Z4I7 341 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms