RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SHKBP1Q8TBC3 707 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 DDX1Q92499 740 aaKnown RBP12.4□□□□□ -0.42
SF3B2-208ENST00000529994 C18orf25Q96B23 403 aaPredicted RBP12.4□□□□□ -0.42
SF3B2-208ENST00000529994 ZFYVE19Q96K21 471 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 MTMR9Q96QG7 549 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 NACC1Q96RE7 527 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 ATRXP46100 2492 aa12.4□□□□□ -0.42
SF3B2-208ENST00000529994 A0A1W2PRU2 124 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 SYN3O14994 580 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 CPB1P15086 417 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 MCM4P33991 863 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 CNR2P34972 360 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 PXNP49023 591 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-208ENST00000529994 MRPL58Q14197 206 aaKnown RBP12.39□□□□□ -0.43
SF3B2-208ENST00000529994 NBR1Q14596 966 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 PON2Q15165 354 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 PPP2R5AQ15172 486 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 ZNF568Q3ZCX4 644 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 STXBP5Q5T5C0 1151 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TPGS2Q68CL5 300 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 ALKAL1Q6UXT8 129 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 CCDC94Q9BW85 323 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-208ENST00000529994 SMOC1Q9H4F8 434 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TRPV4Q9HBA0 871 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TUFT1Q9NNX1 390 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TOPORSQ9NS56 1045 aaPredicted RBP12.39□□□□□ -0.43
SF3B2-208ENST00000529994 SLC38A7Q9NVC3 462 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 AFF4Q9UHB7 1163 aaKnown RBP12.39□□□□□ -0.43
SF3B2-208ENST00000529994 TNFSF13BQ9Y275 285 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 LAMA1P25391 3075 aa12.39□□□□□ -0.43
SF3B2-208ENST00000529994 EML5Q05BV3 1969 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 SPECC1L-ADORA2AF8WAN1 911 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 K7ERI5 159 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 CHADO15335 359 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 HARSP12081 509 aaKnown RBP12.38□□□□□ -0.43
SF3B2-208ENST00000529994 CTHP32929 405 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 GRM5P41594 1212 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 EPHA5P54756 1037 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 TTC38Q5R3I4 469 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 MCTP1Q6DN14 999 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 ZNF280DQ6N043 979 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 APBB1IPQ7Z5R6 666 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-208ENST00000529994 FBXO18Q8NFZ0 1043 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 TMX3Q96JJ7 454 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 TBC1D32Q96NH3 1257 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 PGLYRP2Q96PD5 576 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 CDT1Q9H211 546 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-208ENST00000529994 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
SF3B2-208ENST00000529994 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
SF3B2-208ENST00000529994 YIPF1Q9Y548 306 aa12.38□□□□□ -0.43
SF3B2-208ENST00000529994 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 TM4SF5O14894 197 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 EXTL3O43909 919 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 FOXD2O60548 495 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 PAPSS2O95340 614 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 OR52Z1P0C646 297 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 EFNA5P52803 228 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 TNK2Q07912 1038 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 XKR4Q5GH76 650 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 DGKKQ5KSL6 1271 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 STPG1Q5TH74 334 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 PKN3Q6P5Z2 889 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 KBTBD6Q86V97 674 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 DDX12PQ92771 950 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
SF3B2-208ENST00000529994 ACO2Q99798 780 aaKnown RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 POLR3CQ9BUI4 534 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 TIMM13Q9Y5L4 95 aaPredicted RBP12.37□□□□□ -0.43
SF3B2-208ENST00000529994 NUP210Q8TEM1 1887 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 DPYSL4O14531 572 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 MEFVO15553 781 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 VNN2O95498 520 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 ZNF806P0C7X5 589 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 GJB2P29033 226 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 RPL9P32969 192 aaKnown RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 CDR1P51861 262 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 LIMK1P53667 647 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 MLLT6P55198 1093 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 SHC2P98077 582 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 FCHO2Q0JRZ9 810 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 DUSP4Q13115 394 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 CCINQ13939 588 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 COL9A2Q14055 689 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 ECM1Q16610 540 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 SEZ6Q53EL9 994 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
SF3B2-208ENST00000529994 TMC8Q8IU68 726 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 LEMD2Q8NC56 503 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 APPL2Q8NEU8 664 aa12.36□□□□□ -0.43
SF3B2-208ENST00000529994 ERMNQ8TAM6 284 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms