RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 IGKV5-2P06315 115 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FAM200BP0CF97 657 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 SERPINB5P36952 375 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 GPC3P51654 580 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 SIK1P57059 783 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 PLIN5Q00G26 463 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ITIH4Q14624 930 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 EPC2Q52LR7 807 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 SPDYAQ5MJ70 313 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FAM196AQ6ZSG2 479 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 RRM2BQ7LG56 351 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ABI1Q8IZP0 508 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 MKNK1Q9BUB5 465 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 NDEL1Q9GZM8 345 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 EHD4Q9H223 541 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ATP6V0A4Q9HBG4 840 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 FAM217BQ9NTX9 383 aaPredicted RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 STMN3Q9NZ72 180 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 RGL1Q9NZL6 768 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 DDX20Q9UHI6 824 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 DMGDHQ9UI17 866 aaKnown RBP8□□□□□ -1.13
CTNND1-223ENST00000529986 APPL1Q9UKG1 709 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 ALG6Q9Y672 507 aa8□□□□□ -1.13
CTNND1-223ENST00000529986 IQSEC2Q5JU85 1478 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 LCP1P13796 627 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 PPARGP37231 505 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 EIF2B2P49770 351 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 KRT33BQ14525 404 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 KIZQ2M2Z5 673 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 TRAPPC11Q7Z392 1133 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 HDDC2Q7Z4H3 204 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 USP33Q8TEY7 942 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 PRCCQ92733 491 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 FAM162AQ96A26 154 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ANKZF1Q9H8Y5 726 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 BARHL2Q9NY43 387 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 FAM153AQ9UHL3 310 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 USP32Q8NFA0 1604 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 KIDINS220Q9ULH0 1771 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 PWP1Q13610 501 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 KRT72Q14CN4 511 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ARHGAP27Q6ZUM4 889 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 DPP9Q86TI2 863 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 GLMNQ92990 594 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 C18orf8Q96DM3 657 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 CEP95Q96GE4 821 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ELMO2Q96JJ3 720 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 MCEEQ96PE7 176 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 DHX36Q9H2U1 1008 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 LEMD3Q9Y2U8 911 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 TAF6LQ9Y6J9 622 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ITSN1Q15811 1721 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 AP3B1O00203 1094 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 RAD17O75943 681 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SASH3O75995 380 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ALBP02768 609 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 MYL2P10916 166 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 PSMC3P17980 439 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 NFKBIAP25963 317 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SMTNL2Q2TAL5 461 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 FUT11Q495W5 492 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 WLSQ5T9L3 541 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 MEI1Q5TIA1 1274 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SCN4BQ8IWT1 228 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SCUBE1Q8IWY4 988 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 RCOR2Q8IZ40 523 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SRBD1Q8N5C6 995 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 MTERF3Q96E29 417 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 WNK4Q96J92 1243 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 AGBL1Q96MI9 1066 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 EIF2AK1Q9BQI3 630 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 DCUN1D5Q9BTE7 237 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 TMEM245Q9H330 911 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 USE1Q9NZ43 259 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 APEX2Q9UBZ4 518 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SNX13Q9Y5W8 968 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 CAPN6Q9Y6Q1 641 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 HSPA1AP0DMV8 641 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 HSPA1BP0DMV9 641 aaKnown RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 TFE3P19532 575 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ANXA13P27216 316 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 COILP38432 576 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-223ENST00000529986 AP3B2Q13367 1082 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 C16orf72Q14CZ0 275 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 DCAF15Q66K64 600 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 SGF29Q96ES7 293 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 EPAS1Q99814 870 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 LXNQ9BS40 222 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 STK33Q9BYT3 514 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 CYLDQ9NQC7 956 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 NRXN1Q9ULB1 1477 aa7.99□□□□□ -1.13
CTNND1-223ENST00000529986 ADGRA2Q96PE1 1338 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 H7C1W4 665 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 GH2P01242 217 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 SNRPAP09012 282 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 TBXAS1P24557 533 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 RFC5P40937 340 aa7.98□□□□□ -1.13
CTNND1-223ENST00000529986 EXOSC10Q01780 885 aaKnown RBP7.98□□□□□ -1.13
CTNND1-223ENST00000529986 WDR93Q6P2C0 686 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms