RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 H7C4K7 107 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 NR3C1P04150 777 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 SPATA31D3P0C874 917 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 OR1D2P34982 312 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 ITIH3Q06033 890 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 NFIL3Q16649 462 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 DUOXA2Q1HG44 320 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 COBLL1Q53SF7 1204 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 SPATA31D4Q6ZUB0 917 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 WDR49Q8IV35 697 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 SMYD4Q8IYR2 804 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 BORCS6Q96GS4 357 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 SENP8Q96LD8 212 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 APOL5Q9BWW9 433 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 GTPBP4Q9BZE4 634 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 PLEKHA4Q9H4M7 779 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 SFXN1Q9H9B4 322 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 ITGA11Q9UKX5 1188 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 CDY1Q9Y6F8 540 aa13.69□□□□□ -0.22
CCDC90B-216ENST00000529856 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 OAZ2O95190 189 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 TNNC2P02585 160 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 ITGB3P05106 788 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 TMEM191BP0C7N4 346 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 TYMPP19971 482 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 POLR2BP30876 1174 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 PNPLA4P41247 253 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 PRCPP42785 496 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 TAF6P49848 677 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 RBP5P82980 135 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 SV2CQ496J9 727 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 RARS2Q5T160 578 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 SCARA3Q6AZY7 606 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 CES5AQ6NT32 575 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 ELMSAN1Q6PJG2 1045 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 CSGALNACT2Q8N6G5 542 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 CCDC127Q96BQ5 260 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 ANKRD36BP1Q96IX9 119 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 FAM84AQ96KN4 292 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF560Q96MR9 790 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 UHRF1Q96T88 793 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 POP1Q99575 1024 aaKnown RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 CGRRF1Q99675 332 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 MTMR12Q9C0I1 747 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 SIX4Q9UIU6 781 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 FBXL5Q9UKA1 691 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 FBXW11Q9UKB1 542 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 AGAP1Q9UPQ3 857 aa13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-216ENST00000529856 VCANP13611 3396 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 ARHGEF37A1IGU5 675 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 KPNA7A9QM74 516 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CYB561D2O14569 222 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 PAPLNO95428 1278 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 DLATP10515 647 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 TNNI1P19237 187 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CASP4P49662 377 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CBX2Q14781 532 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CTXN3Q4LDR2 81 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 ZCWPW2Q504Y3 356 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 ATAT1Q5SQI0 421 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF280DQ6N043 979 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 TMC5Q6UXY8 1006 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 GPR149Q86SP6 731 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 USP37Q86T82 979 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CMASQ8NFW8 434 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 PLEKHO2Q8TD55 490 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 ZNF516Q92618 1163 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 OXCT2Q9BYC2 517 aaPredicted RBP13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 MAN1B1Q9UKM7 699 aa13.67□□□□□ -0.22
CCDC90B-216ENST00000529856 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 SPDYE4A6NLX3 237 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 DLL1O00548 723 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 MAPK13O15264 365 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ABLIM3O94929 683 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 CYP11A1P05108 521 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 KRT19P08727 400 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ODC1P11926 461 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 NR2F2P24468 414 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 MTHFRP42898 656 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 CLDN10P78369 228 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ROR1Q01973 937 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ZP2Q05996 745 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 ADAM9Q13443 819 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 EDRF1Q3B7T1 1238 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
CCDC90B-216ENST00000529856 OVOS1Q6IE37 1185 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms