RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 NFICP08651 508 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 SPATA31D3P0C874 917 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 PFKFB1P16118 471 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 HOXD13P35453 343 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 ROR1Q01973 937 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 PTPN21Q16825 1174 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 BMT2Q1RMZ1 405 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 ZNF280DQ6N043 979 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 SPATA31D4Q6ZUB0 917 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 OTOP3Q7RTS5 596 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 EFCAB13Q8IY85 973 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 TDRD5Q8NAT2 981 aaKnown RBP16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 GLIS3Q8NEA6 775 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 ZNF461Q8TAF7 563 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 SERTAD1Q9UHV2 236 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 CACNA1HO95180 2353 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 WDR27A2RRH5 827 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 KLRC4O43908 158 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 EXTL3O43909 919 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 C8AP07357 584 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 TYMPP19971 482 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 LILRA4P59901 499 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 NUCB2P80303 420 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 ZXDAP98168 799 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 CUL4BQ13620 913 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 TPGS2Q68CL5 300 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 BMP8AQ7Z5Y6 402 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 ACSF2Q96CM8 615 aaPredicted RBP16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 FBXL5Q9UKA1 691 aa16.74■□□□□ 0.27
CCDC90B-215ENST00000529745 A0A1B0GVL5 298 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 ARHGEF37A1IGU5 675 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 PPEF2O14830 753 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 CYP11A1P05108 521 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 ATF2P15336 505 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 GUCY2FP51841 1108 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 PPM1LQ5SGD2 360 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 IER5LQ5T953 404 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 ARMCX5Q6P1M9 558 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 C12orf56Q8IXR9 622 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 TCEAL8Q8IYN2 117 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 TMEM130Q8N3G9 435 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 ZSWIM2Q8NEG5 633 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 PAGE5Q96GU1 130 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 FAM213AQ9BRX8 229 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 KIAA1586Q9HCI6 787 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 DPP3Q9NY33 737 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 CGNQ9P2M7 1197 aaKnown RBP16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 SORCS3Q9UPU3 1222 aa16.73■□□□□ 0.27
CCDC90B-215ENST00000529745 TGFB1I1O43294 461 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 CASP1P29466 404 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 AFMP43652 599 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 WNT7BP56706 349 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 YWHAHQ04917 246 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 PSMD2Q13200 908 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 CTXN3Q4LDR2 81 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 SLC7A14Q8TBB6 771 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 TMEM174Q8WUU8 243 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 SAAL1Q96ER3 474 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 BLZF1Q9H2G9 400 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 AVENQ9NQS1 362 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 TSHZ2Q9NRE2 1034 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 RBAKQ9NYW8 714 aaPredicted RBP16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 EPS15L1Q9UBC2 864 aa16.72■□□□□ 0.27
CCDC90B-215ENST00000529745 OR6C75A6NL08 312 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 SPTLC1O15269 473 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 N4BP1O75113 896 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 XYLBO75191 536 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 ODC1P11926 461 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 SYKP43405 635 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 TAF6P49848 677 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 SIGLEC14Q08ET2 396 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 TCF15Q12870 199 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 MYBPC2Q14324 1141 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 SURF1Q15526 300 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 DSTYKQ6XUX3 929 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 TRIM67Q6ZTA4 783 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 UBALD2Q8IYN6 164 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 CXorf38Q8TB03 319 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 CACTINQ8WUQ7 758 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 SENP8Q96LD8 212 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 PRRX2Q99811 253 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 PIDD1Q9HB75 910 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 AGPAT3Q9NRZ7 376 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 HSPBP1Q9NZL4 362 aa16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 AFF4Q9UHB7 1163 aaKnown RBP16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 ZFP37Q9Y6Q3 630 aaPredicted RBP16.71■□□□□ 0.27
CCDC90B-215ENST00000529745 KMT2EQ8IZD2 1858 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms