RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 GAS6Q14393 721 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 SF3A2Q15428 464 aaKnown RBP11.52□□□□□ -0.57
CPSF1-203ENST00000527916 PRSS36Q5K4E3 855 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 STPG1Q5TH74 334 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 IQCEQ6IPM2 695 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 RINT1Q6NUQ1 792 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 VITQ6UXI7 678 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 C1orf186Q6ZWK4 172 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 YAF2Q8IY57 180 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 FAM200AQ8TCP9 573 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 E2F7Q96AV8 911 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 ARRDC1-AS1Q9H2J1 176 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 C8orf33Q9H7E9 229 aaPredicted RBP11.52□□□□□ -0.57
CPSF1-203ENST00000527916 ZMIZ1Q9ULJ6 1067 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 RBM19Q9Y4C8 960 aaKnown RBP11.52□□□□□ -0.57
CPSF1-203ENST00000527916 DMXL2Q8TDJ6 3036 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 TICRRQ7Z2Z1 1910 aa11.52□□□□□ -0.57
CPSF1-203ENST00000527916 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 PP2D1A8MPX8 630 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 TMEM189-UBE2V1I3L0A0 370 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 K7ESF4 209 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 RECQL4O94761 1208 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 KCNK5O95279 499 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 BMP15O95972 392 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 GUCY2CP25092 1073 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 CDC25AP30304 524 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 KPNA1P52294 538 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-203ENST00000527916 DCAF4L1Q3SXM0 396 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 CACNA2D4Q7Z3S7 1137 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 BRAPQ7Z569 592 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 APBB1IPQ7Z5R6 666 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-203ENST00000527916 WDR5BQ86VZ2 330 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 MFSD6LQ8IWD5 586 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 DAW1Q8N136 415 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-203ENST00000527916 LEMD2Q8NC56 503 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 TCEAL4Q96EI5 215 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 AK8Q96MA6 479 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 UROC1Q96N76 676 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 LSM14BQ9BX40 385 aaKnown RBP11.51□□□□□ -0.57
CPSF1-203ENST00000527916 GPR88Q9GZN0 384 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 CYP4F11Q9HBI6 524 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 SNTG2Q9NY99 539 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 TNFSF13BQ9Y275 285 aa11.51□□□□□ -0.57
CPSF1-203ENST00000527916 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 HIP1RO75146 1068 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ABLIM3O94929 683 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ATF2P15336 505 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 TKTP29401 623 aaKnown RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 VIPR2P41587 438 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 NPTX2P47972 431 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 PEX3P56589 373 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ROR1Q01973 937 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 MAPK7Q13164 816 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 NAB2Q15742 525 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 SLC8B1Q6J4K2 584 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 PSAPL1Q6NUJ1 521 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 POTEHQ6S545 545 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 KCNK18Q7Z418 384 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 TCEAL8Q8IYN2 117 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 SYNPOQ8N3V7 929 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 KDF1Q8NAX2 398 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ZSCAN18Q8TBC5 510 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 KCNN1Q92952 543 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 DDX27Q96GQ7 796 aaKnown RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 ZNF512Q96ME7 567 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-203ENST00000527916 PNMA5Q96PV4 448 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 SLITRK6Q9H5Y7 841 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 TRPV4Q9HBA0 871 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 PTPRHQ9HD43 1115 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 PCDHGA5Q9Y5G8 931 aa11.5□□□□□ -0.57
CPSF1-203ENST00000527916 CITO14578 2027 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 VWA3AA6NCI4 1184 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 HEPACAM2A8MVW5 462 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 C1QTNF9BB2RNN3 333 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 H7C4K7 107 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 RPP40O75818 363 aaKnown RBP11.49□□□□□ -0.57
CPSF1-203ENST00000527916 EPN2O95208 641 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 EDN1P05305 212 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 C1QTNF9P0C862 333 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 PDCP20941 246 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 CLCNKBP51801 687 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 SLC12A3P55017 1021 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 ARPP19P56211 112 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 CCDC6Q16204 474 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 EEF1DP3Q658K8 133 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 TPGS2Q68CL5 300 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 RNF43Q68DV7 783 aa11.49□□□□□ -0.57
CPSF1-203ENST00000527916 RALGPS2Q86X27 583 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-203ENST00000527916 SPIRE2Q8WWL2 714 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms