RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 IFNB1P01574 187 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 KITP10721 976 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 MAPK4P31152 587 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 FASTKD3Q14CZ7 662 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 SIX1Q15475 284 aaPredicted RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 ALYREFQ86V81 257 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 SPDYE16A6NNV3 312 aaPredicted RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 TP73O15350 636 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 SLC16A3O15427 465 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 SORBS3O60504 671 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 CLPTM1O96005 669 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 HIRAP54198 1017 aaPredicted RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 PLCB3Q01970 1234 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 PDIA2Q13087 525 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 COG2Q14746 738 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 KAZNQ674X7 775 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 ANKRD23Q86SG2 305 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 ARL10Q8N8L6 244 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 RBM15BQ8NDT2 890 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 ERMNQ8TAM6 284 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 OXNAD1Q96HP4 312 aaPredicted RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
TSKU-203ENST00000527881 CIDEBQ9UHD4 219 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 ZNF148Q9UQR1 794 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 SH3GLB1Q9Y371 365 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 BCORQ6W2J9 1755 aa13.18□□□□□ -0.3
TSKU-203ENST00000527881 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 RARBP10826 455 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 HOXD13P35453 343 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PDK3Q15120 406 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 HSP90AA5PQ58FG0 334 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 C1orf228Q6PIY5 440 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 ULK2Q8IYT8 1036 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 GRIP2Q9C0E4 1043 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PSMC3IPQ9P2W1 217 aaPredicted RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 MARCOQ9UEW3 520 aaPredicted RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 MEI4A8MW99 385 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 ZNF862O60290 1169 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 DNAJC6O75061 913 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 GRIA2P42262 883 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 ARL4CP56559 192 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 DCTN2Q13561 401 aaKnown RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 SYDE1Q6ZW31 735 aaPredicted RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 PPM1KQ8N3J5 372 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 FBXO27Q8NI29 283 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PANX3Q96QZ0 392 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 SLC17A7Q9P2U7 560 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 FAM237BA0A1B0GVD1 139 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 PDE5AO76074 875 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 ALDH18A1P54886 795 aaKnown RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 AQP4P55087 323 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 DLG1Q12959 904 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 GRAMD4Q6IC98 578 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
TSKU-203ENST00000527881 ZNF287Q9HBT7 754 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 KANSL3Q9P2N6 904 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 IKBKGQ9Y6K9 419 aa13.17□□□□□ -0.3
TSKU-203ENST00000527881 TRPA1O75762 1119 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 SGPL1O95470 568 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 RALAP11233 206 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 VCLP18206 1134 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 IVDP26440 423 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 PRR16Q569H4 304 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
TSKU-203ENST00000527881 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 RAB3IL1Q8TBN0 382 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 MORC4Q8TE76 937 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 GCNAQ96QF7 691 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 BOLA2-SMG1P6H3BVE0 249 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
TSKU-203ENST00000527881 BGNP21810 368 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 CRABP2P29373 138 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 CHN2P52757 468 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 SFT2D3Q587I9 215 aa13.16□□□□□ -0.3
TSKU-203ENST00000527881 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
TSKU-203ENST00000527881 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
TSKU-203ENST00000527881 C12orf50Q8NA57 414 aaPredicted RBP13.16□□□□□ -0.3
TSKU-203ENST00000527881 HSPBAP1Q96EW2 488 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms