RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 TSC2P49815 1807 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 LOC730098B7Z3J9 87 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 M0QZQ0 153 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 EIF3DO15371 548 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 EXTL3O43909 919 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 PAPLNO95428 1278 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 VNN2O95498 520 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 ADH1AP07327 375 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 HOXB8P17481 243 aaPredicted RBP9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 CYP3A5P20815 502 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 ABCD1P33897 745 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 OR1D2P34982 312 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 LILRA4P59901 499 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 ALCAMQ13740 583 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 CBX2Q14781 532 aaPredicted RBP9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 POSTNQ15063 836 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 KYAT1Q16773 422 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 BRSK2Q8IWQ3 736 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 ADHFE1Q8IWW8 467 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 GJD3Q8N144 294 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 OR5B17Q8NGF7 314 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 PLEKHO2Q8TD55 490 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 SUSD3Q96L08 255 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 POP1Q99575 1024 aaKnown RBP9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 KCTD10Q9H3F6 313 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 POMKQ9H5K3 350 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 ASB7Q9H672 318 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 TMEM206Q9H813 350 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 DPP3Q9NY33 737 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 HSPBP1Q9NZL4 362 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 STK39Q9UEW8 545 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 USP25Q9UHP3 1055 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 UBQLN1Q9UMX0 589 aaKnown RBP9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 EXOC7Q9UPT5 735 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 CDY1Q9Y6F8 540 aa9.61□□□□□ -0.87
CCDC90B-208ENST00000527025 CCDC195A0A1B0GUA6 201 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 GOLGA6L4A6NEF3 574 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 N4BP1O75113 896 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 SEC24AO95486 1093 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 GLUD1P00367 558 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RPN1P04843 607 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 SP100P23497 879 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 MCM4P33991 863 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 CDR1P51861 262 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 ELAVL2Q12926 359 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 PNOCQ13519 176 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RAB33AQ14088 237 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 TMEM132DQ14C87 1099 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 LMBRD2Q68DH5 695 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 ARMCX5Q6P1M9 558 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 GPR149Q86SP6 731 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 PPFIBP1Q86W92 1011 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 CD302Q8IX05 232 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 GPD1LQ8N335 351 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 C1orf127Q8N9H9 656 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RDH13Q8NBN7 331 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 TIGD1Q96MW7 591 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RTP3Q9BQQ7 232 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 C11orf16Q9NQ32 467 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 RBAKQ9NYW8 714 aaPredicted RBP9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 PRKAG3Q9UGI9 489 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 SIX4Q9UIU6 781 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 FBXL5Q9UKA1 691 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 FBXW11Q9UKB1 542 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 MAPK8IP1Q9UQF2 711 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 DERAQ9Y315 318 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 NUB1Q9Y5A7 615 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 BACE2Q9Y5Z0 518 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 MYO10Q9HD67 2058 aa9.6□□□□□ -0.87
CCDC90B-208ENST00000527025 FSD2A1L4K1 749 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 WDR27A2RRH5 827 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 NRG2O14511 850 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 ABLIM3O94929 683 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 RHOBTB3O94955 611 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 OAZ2O95190 189 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 OR4Q2P0C623 313 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 CASP4P49662 377 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 CYP2J2P51589 502 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 POU5F1Q01860 360 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 ROR1Q01973 937 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 ITIH3Q06033 890 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 KNOP1Q1ED39 458 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 SLC8B1Q6J4K2 584 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 RNF135Q8IUD6 432 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 SMYD4Q8IYR2 804 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 KREMEN2Q8NCW0 462 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 NOC3LQ8WTT2 800 aaKnown RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 TSPAN18Q96SJ8 248 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 TMEM209Q96SK2 561 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 PHF7Q9BWX1 381 aaPredicted RBP9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 CRISPLD1Q9H336 500 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 SFXN1Q9H9B4 322 aa9.59□□□□□ -0.87
CCDC90B-208ENST00000527025 DZANK1Q9NVP4 752 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms