RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 SMIM28A0A1B0GU29 152 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 C4orf47A7E2U8 309 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 PODXLO00592 558 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 GJA1P17302 382 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 IGFBP6P24592 240 aaPredicted RBP11.84□□□□□ -0.51
CTSB-212ENST00000526645 EFNA5P52803 228 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 RING1Q06587 406 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 PLK5Q496M5 336 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 BMP2KLQ5H9B9 411 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 EEF1DP3Q658K8 133 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 TCEAL6Q6IPX3 200 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 C11orf74Q86VG3 221 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 ARID3BQ8IVW6 561 aaPredicted RBP11.84□□□□□ -0.51
CTSB-212ENST00000526645 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 DEPTORQ8TB45 409 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 TCEAL3Q969E4 200 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 SUSD3Q96L08 255 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 TMEM209Q96SK2 561 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 CCDC94Q9BW85 323 aaPredicted RBP11.84□□□□□ -0.51
CTSB-212ENST00000526645 SCNM1Q9BWG6 230 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 SMOC1Q9H4F8 434 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 TMEM9BQ9NQ34 198 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 GPRC5CQ9NQ84 441 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 GTSE1Q9NYZ3 720 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 NEUROG3Q9Y4Z2 214 aa11.84□□□□□ -0.51
CTSB-212ENST00000526645 KIF26AQ9ULI4 1882 aaPredicted RBP11.84□□□□□ -0.51
CTSB-212ENST00000526645 A0A1W2PRU2 124 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 LNP1A1A4G5 178 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 BCLAF3A2AJT9 711 aaKnown RBP11.83□□□□□ -0.52
CTSB-212ENST00000526645 GIPC1O14908 333 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 CAVIN2O95810 425 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 ATP2B1P20020 1258 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 PSMA5P28066 241 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 WEE1P30291 646 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 RPL9P32969 192 aaKnown RBP11.83□□□□□ -0.52
CTSB-212ENST00000526645 GRM5P41594 1212 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 PXNP49023 591 aaPredicted RBP11.83□□□□□ -0.52
CTSB-212ENST00000526645 GRSF1Q12849 480 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTSB-212ENST00000526645 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 XKR4Q5GH76 650 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 PIK3AP1Q6ZUJ8 805 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 TMC8Q8IU68 726 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 BEST2Q8NFU1 509 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 BPIFB1Q8TDL5 484 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 PIGOQ8TEQ8 1089 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 EXOC4Q96A65 974 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 DUSP15Q9H1R2 295 aaPredicted RBP11.83□□□□□ -0.52
CTSB-212ENST00000526645 THG1LQ9NWX6 298 aaKnown RBP11.83□□□□□ -0.52
CTSB-212ENST00000526645 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 EML5Q05BV3 1969 aa11.83□□□□□ -0.52
CTSB-212ENST00000526645 TAF4O00268 1085 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 SPINK2P20155 84 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 MCM2P49736 904 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 EPHB3P54753 998 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 AMPD2Q01433 879 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 CREB5Q02930 508 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 SOX4Q06945 474 aaPredicted RBP11.82□□□□□ -0.52
CTSB-212ENST00000526645 TMEM196Q5HYL7 178 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 MAEAQ7L5Y9 396 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 AIFM3Q96NN9 605 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 LRRC3Q9BY71 257 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 TTC12Q9H892 705 aaPredicted RBP11.82□□□□□ -0.52
CTSB-212ENST00000526645 ZMYM5Q9UJ78 669 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 KCNJ14Q9UNX9 436 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 TNFSF13BQ9Y275 285 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 SNX14Q9Y5W7 946 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 PHLPP2Q6ZVD8 1323 aa11.82□□□□□ -0.52
CTSB-212ENST00000526645 KHNYNO15037 678 aaKnown RBP11.81□□□□□ -0.52
CTSB-212ENST00000526645 CDKL5O76039 1030 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 EDN1P05305 212 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 KCNE1P15382 129 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 LIG1P18858 919 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 HOXC13P31276 330 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 MCM4P33991 863 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 HSPA4P34932 840 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 CALCRLQ16602 461 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 FBXO43Q4G163 708 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 PKN3Q6P5Z2 889 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 TTC8Q8TAM2 541 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 DDX12PQ92771 950 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 ACDQ96AP0 544 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 ZNF274Q96GC6 653 aaPredicted RBP11.81□□□□□ -0.52
CTSB-212ENST00000526645 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 MKNK1Q9BUB5 465 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 TUFT1Q9NNX1 390 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 EBF1Q9UH73 591 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
CTSB-212ENST00000526645 MSRB2Q9Y3D2 182 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms