RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 ACCSLQ4AC99 568 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 ZNF618Q5T7W0 954 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 MICALL2Q8IY33 904 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 RBM41Q96IZ5 413 aaKnown RBP12.96□□□□□ -0.33
FGFR1-227ENST00000526570 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
FGFR1-227ENST00000526570 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SCNN1BP51168 640 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 YWHAEP62258 255 aaKnown RBP12.96□□□□□ -0.33
FGFR1-227ENST00000526570 ADAM9Q13443 819 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SLC15A2Q16348 729 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SPOPLQ6IQ16 392 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 CCDC127Q96BQ5 260 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 CEP95Q96GE4 821 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 C12orf4Q9NQ89 552 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SUN2Q9UH99 717 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 CCDC162PA2VCL2 907 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 LRRC53A6NM62 1247 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 O00370 1275 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 CAV1Q03135 178 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 MAPK11Q15759 364 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SCG3Q8WXD2 468 aaKnown RBP12.96□□□□□ -0.33
FGFR1-227ENST00000526570 SLC7A3Q8WY07 619 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 GLMNQ92990 594 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 TTC25Q96NG3 672 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 PHACTR1Q9C0D0 580 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 KLHL4Q9C0H6 718 aa12.96□□□□□ -0.33
FGFR1-227ENST00000526570 TMEM120BA0PK00 339 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 MATN2O00339 956 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 RAD51CO43502 376 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 JAK1P23458 1154 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 IYDQ6PHW0 289 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 C1orf228Q6PIY5 440 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 GJA10Q969M2 543 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 CEP170P1Q96L14 293 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 CASP5P51878 434 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 NKX1-1Q15270 411 aaPredicted RBP12.96□□□□□ -0.34
FGFR1-227ENST00000526570 GINM1Q9NU53 330 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.34
FGFR1-227ENST00000526570 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.34
FGFR1-227ENST00000526570 FEM1BQ9UK73 627 aa12.96□□□□□ -0.34
FGFR1-227ENST00000526570 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.34
FGFR1-227ENST00000526570 SAC3D1A6NKF1 404 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 PSTPIP1O43586 416 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
FGFR1-227ENST00000526570 TRIM65Q6PJ69 517 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 HMG20AQ9NP66 347 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SELENONQ9NZV5 590 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 UBE4BO95155 1302 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 ADCY6O43306 1168 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 DPEP1P16444 411 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 ALDH18A1P54886 795 aaKnown RBP12.95□□□□□ -0.34
FGFR1-227ENST00000526570 MPP3Q13368 585 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 LONRF1Q17RB8 773 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 WASHC2DQ5SRD0 308 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 OR8H2Q8N162 312 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 STK32AQ8WU08 396 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 AK8Q96MA6 479 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 MXD3Q9BW11 206 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 ISCUQ9H1K1 167 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SCN3BQ9NY72 215 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 ADGRB1O14514 1584 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 CCDC195A0A1B0GUA6 201 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 USP17L10C9JJH3 530 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 CCNE1P24864 410 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 PSMC6P62333 389 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 NR1I3Q14994 352 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SENP1Q9P0U3 644 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SYNGAP1Q96PV0 1343 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 ASAP2O43150 1006 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 FAM58BPP0C7Q3 252 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 IFNA8P32881 189 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SOX6P35712 828 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SPP2Q13103 211 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 DMC1Q14565 340 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 MAPRE2Q15555 327 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 PPP1R16BQ96T49 567 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 MLPHQ9BV36 600 aaPredicted RBP12.95□□□□□ -0.34
FGFR1-227ENST00000526570 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
FGFR1-227ENST00000526570 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
FGFR1-227ENST00000526570 HOXC10Q9NYD6 342 aa12.95□□□□□ -0.34
FGFR1-227ENST00000526570 SLC12A1Q13621 1099 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 MTERF2Q49AM1 385 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 SMARCAD1Q9H4L7 1026 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
FGFR1-227ENST00000526570 ZBTB5O15062 677 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 PLOD1Q02809 727 aaPredicted RBP12.94□□□□□ -0.34
FGFR1-227ENST00000526570 KLHL38Q2WGJ6 581 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
FGFR1-227ENST00000526570 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
FGFR1-227ENST00000526570 ALKBH5Q6P6C2 394 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms