RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 AMY1AP04745 511 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 MYCLP1P12525 358 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 DDCP20711 480 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 EPHB2P29323 1055 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 MCAMP43121 646 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 SLC6A9P48067 706 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 FOXG1P55316 489 aaPredicted RBP3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 RPS7P62081 194 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 MORN5Q5VZ52 161 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 ZNF66Q6ZN08 573 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 KCNK18Q7Z418 384 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 YTHDF3Q7Z739 585 aaKnown RBP3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 CLNKQ7Z7G1 428 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 MYCBPAPQ8TBZ2 947 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 LMBR1Q8WVP7 490 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 TLR10Q9BXR5 811 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 NRIP3Q9NQ35 241 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 SERGEFQ9UGK8 458 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 PLAAQ9Y263 795 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 TBC1D30Q9Y2I9 924 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 PCDHGA2Q9Y5H1 932 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 A0A087X0B3 334 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 VWC2LB2RUY7 222 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 ZEB2O60315 1214 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 PDE8AO60658 829 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 AGFG2O95081 481 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 MALLQ13021 153 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 MTM1Q13496 603 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 ANO4Q32M45 955 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 AWAT2Q6E213 333 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 DDX46Q7L014 1031 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 NEK8Q86SG6 692 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 ZGPATQ8N5A5 531 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 NSUN7Q8NE18 718 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 NLGN4YQ8NFZ3 816 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 SPATA3Q8NHX4 192 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 DENND1AQ8TEH3 1009 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 SREK1Q8WXA9 508 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 TTC1Q99614 292 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 SH2D3AQ9BRG2 576 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 DNM3Q9UQ16 869 aa3.86□□□□□ -1.79
ECHDC1-219ENST00000526299 WDR27A2RRH5 827 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 CDC45O75419 566 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 PPP3CBP16298 524 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 KCNA2P16389 499 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 TKTP29401 623 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 HNRNPMP52272 730 aaKnown RBP eCLIP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 SRSF2Q01130 221 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 DYRK1AQ13627 763 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 DHCR24Q15392 516 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 SUPT20HL1Q3ZLR7 823 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 UTP14CQ5TAP6 766 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 SUMO4Q6EEV6 95 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 CAMKK1Q8N5S9 505 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 QTRT1Q9BXR0 403 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 SEMA4CQ9C0C4 833 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 VTA1Q9NP79 307 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 CTTNBP2NLQ9P2B4 639 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 MAPRE3Q9UPY8 281 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 CDYLQ9Y232 598 aa3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 MYBBP1AQ9BQG0 1328 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-219ENST00000526299 GCOM1H8Y6P7 765 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 HNRNPCP07910 306 aaKnown RBP eCLIP3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 ZNF844Q08AG5 666 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 STRN3Q13033 797 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 ATP2B3Q16720 1220 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 PREPLQ4J6C6 727 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 SLC44A4Q53GD3 710 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 ADGRG5Q8IZF4 528 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 B3GALNT2Q8NCR0 500 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 OR2I1PQ8NGU4 316 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 DPF2Q92785 391 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 SPRTNQ9H040 489 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 C11orf54Q9H0W9 315 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 MANSC1Q9H8J5 431 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 ANLNQ9NQW6 1124 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 DNAJC28Q9NX36 388 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 MTMR4Q9NYA4 1195 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 NR2E3Q9Y5X4 410 aa3.84□□□□□ -1.79
ECHDC1-219ENST00000526299 PPEF2O14830 753 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 TTLL1O95922 423 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 CD1AP06126 327 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC6A4P31645 630 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 ATP8B2P98198 1209 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 MC2RQ01718 297 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 MGAT2Q10469 447 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 DACT2Q5SW24 774 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC18B1Q6NT16 456 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 UBR7Q8N806 425 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 SNX19Q92543 992 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 ORAI2Q96SN7 254 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 ELOVL5Q9NYP7 299 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 NEU2Q9Y3R4 380 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 LRP12Q9Y561 859 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 ADGRA2Q96PE1 1338 aa3.83□□□□□ -1.8
ECHDC1-219ENST00000526299 FAM171A2A8MVW0 826 aa3.82□□□□□ -1.8
ECHDC1-219ENST00000526299 TARM1B6A8C7 271 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms