RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 PARK7Q99497 189 aaKnown RBP6.05□□□□□ -1.44
SVIP-202ENST00000525670 SPATA9Q9BWV2 254 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 KLC2Q9H0B6 622 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 RPAP3Q9H6T3 665 aaPredicted RBP6.05□□□□□ -1.44
SVIP-202ENST00000525670 IPPKQ9H8X2 491 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 KCND1Q9NSA2 647 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 SWAP70Q9UH65 585 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 STX8Q9UNK0 236 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 AGTPBP1Q9UPW5 1226 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 TRIM17Q9Y577 477 aa6.05□□□□□ -1.44
SVIP-202ENST00000525670 PARP14Q460N5 1801 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 ZNF839A8K0R7 811 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 PATE3B3GLJ2 98 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 B4E1Z4 1266 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 HIP1O00291 1037 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 CA12O43570 354 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 CTGFP29279 349 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 BACE1P56817 501 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 SNAP25P60880 206 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 TFAP4Q01664 338 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 IKQ13123 557 aaPredicted RBP6.04□□□□□ -1.44
SVIP-202ENST00000525670 PLS1Q14651 629 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 CDSNQ15517 529 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 CCDC96Q2M329 555 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 FAM83BQ5T0W9 1011 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 OTUD7BQ6GQQ9 843 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 TMEM179Q6ZVK1 233 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 CHST3Q7LGC8 479 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 ANKRD23Q86SG2 305 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 RAB11FIP4Q86YS3 637 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 ZNF444Q8N0Y2 327 aaPredicted RBP6.04□□□□□ -1.44
SVIP-202ENST00000525670 STPG3Q8N7X2 389 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 DEF6Q9H4E7 631 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 SEC61A2Q9H9S3 476 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 IGSF5Q9NSI5 407 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 FBXO28Q9NVF7 368 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 SAGE1Q9NXZ1 904 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 MSRB2Q9Y3D2 182 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 RBM8AQ9Y5S9 174 aaKnown RBP6.04□□□□□ -1.44
SVIP-202ENST00000525670 A0A0G2JMZ2 1700 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 PLXNB2O15031 1838 aa6.04□□□□□ -1.44
SVIP-202ENST00000525670 FRMPD2Q68DX3 1309 aaPredicted RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 RAD50Q92878 1312 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 ADGRA2Q96PE1 1338 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 ACOT7O00154 380 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 CXCL11O14625 94 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 CDC45O75419 566 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 FLOT1O75955 427 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 STK10O94804 968 aaKnown RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 SLC3A2P08195 630 aaKnown RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 RBM25P49756 843 aaKnown RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 SOX10P56693 466 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 SP3Q02447 781 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 PAK1Q13153 545 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 SBK1Q52WX2 424 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 TMED8Q6PL24 325 aaPredicted RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 STOX1Q6ZVD7 989 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 FASTKD5Q7L8L6 764 aaKnown RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 RALYLQ86SE5 291 aaKnown RBP6.03□□□□□ -1.44
SVIP-202ENST00000525670 REXO1L1PQ8IX06 675 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 CKAP2LQ8IYA6 745 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 TCEANC2Q96MN5 208 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 LRRC2Q9BYS8 371 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 MEGF9Q9H1U4 602 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 CPVLQ9H3G5 476 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 TXNRD2Q9NNW7 524 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 CLIP2Q9UDT6 1046 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.03□□□□□ -1.44
SVIP-202ENST00000525670 TRAF6Q9Y4K3 522 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 DOCK3Q8IZD9 2030 aa6.03□□□□□ -1.44
SVIP-202ENST00000525670 RLFQ13129 1914 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 CCDC85CA6NKD9 419 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 H0Y858 1186 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 AQP7O14520 342 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 ZNF213O14771 459 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 PDPK1O15530 556 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 AKAP8O43823 692 aaKnown RBP6.02□□□□□ -1.45
SVIP-202ENST00000525670 TLR2O60603 784 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 IGSF3O75054 1194 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 ZNF623O75123 536 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.45
SVIP-202ENST00000525670 IL18BPO95998 194 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 NDUFB10O96000 172 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 CSF2RBP32927 897 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 PSMC4P43686 418 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 HERVK_113P62684 666 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 PRKCZQ05513 592 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 IMMTQ16891 758 aaKnown RBP6.02□□□□□ -1.45
SVIP-202ENST00000525670 BMP2KLQ5H9B9 411 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 AKNAD1Q5T1N1 836 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 GIMAP6Q6P9H5 292 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 MFSD6Q6ZSS7 791 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 SPATC1Q76KD6 591 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 CYB5R4Q7L1T6 521 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 OTOP1Q7RTM1 612 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 MAMDC2Q7Z304 686 aaPredicted RBP6.02□□□□□ -1.45
SVIP-202ENST00000525670 SPRED1Q7Z699 444 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 CTU1Q7Z7A3 348 aaKnown RBP6.02□□□□□ -1.45
SVIP-202ENST00000525670 NLGN4XQ8N0W4 816 aa6.02□□□□□ -1.45
SVIP-202ENST00000525670 SH3RF2Q8TEC5 729 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms