RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 PAOXQ6QHF9 649 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 NSMFQ6X4W1 530 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 KRT25Q7Z3Z0 450 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 TRABD2AQ86V40 505 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 GPBP1Q86WP2 473 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC30A5Q8TAD4 765 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 SLC20A1Q8WUM9 679 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 KIAA1586Q9HCI6 787 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 ANKFY1Q9P2R3 1169 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 CIDEBQ9UHD4 219 aa11.9□□□□□ -0.5
CLNS1A-204ENST00000525428 ALAS1P13196 640 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 ARFIP2P53365 341 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 AP2B1P63010 937 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 CCDC65Q8IXS2 484 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 OR6Y1Q8NGX8 325 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■■□ 21.4
CLNS1A-204ENST00000525428 MAML1Q92585 1016 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 DGCR14Q96DF8 476 aaKnown RBP11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 MASTLQ96GX5 879 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 SNF8Q96H20 258 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 PANX3Q96QZ0 392 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 GRIP2Q9C0E4 1043 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 ACP6Q9NPH0 428 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 IL1RAPL1Q9NZN1 696 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 MAD2L2Q9UI95 211 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 MYOCOSA0A1B0GUC4 107 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 VILLO15195 856 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 ATF2P15336 505 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 PAX3P23760 479 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 PCSK6P29122 969 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 SOX5P35711 763 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 RGS2P41220 211 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 AQP4P55087 323 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 JAM2P57087 298 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 NR1H3Q13133 447 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 NCOA4Q13772 614 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 ZYXQ15942 572 aaKnown RBP11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 KCTD21Q4G0X4 260 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 SYDE2Q5VT97 1194 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 KLHDC10Q6PID8 442 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 B3GNT6Q6ZMB0 384 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 DENND1AQ8TEH3 1009 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 BCAS3Q9H6U6 928 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 SPATA7Q9P0W8 599 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
CLNS1A-204ENST00000525428 HSPA6P17066 643 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 KRT4P19013 534 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 GTF2IP78347 998 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 MAP3K10Q02779 954 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 MECOMQ03112 1051 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 MTM1Q13496 603 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 BTG3Q14201 252 aaPredicted RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 KLHL35Q6PF15 583 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 RGS9BPQ6ZS82 235 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 TREML1Q86YW5 311 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 STK33Q9BYT3 514 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 TUT1Q9H6E5 874 aaKnown RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 USP29Q9HBJ7 922 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 CD209Q9NNX6 404 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 NCANO14594 1321 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 KLRF2D3W0D1 207 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 CYP26A1O43174 497 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 DNAJC6O75061 913 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 CIB2O75838 187 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 PLS3P13797 630 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 DPEP1P16444 411 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 ITIH2P19823 946 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 RRM1P23921 792 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 CRABP2P29373 138 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 MARSP56192 900 aaKnown RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 KCNA1Q09470 495 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 GRAMD4Q6IC98 578 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 OLFML1Q6UWY5 402 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 ACAD11Q709F0 780 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 ALYREFQ86V81 257 aaKnown RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 TRIM50Q86XT4 487 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 TMEM120AQ9BXJ8 343 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 HEMGNQ9BXL5 484 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 OXCT2Q9BYC2 517 aaPredicted RBP11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 TRIM55Q9BYV6 548 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 RAB34Q9BZG1 259 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 KLHL4Q9C0H6 718 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 VPS37BQ9H9H4 285 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 IL17RBQ9NRM6 502 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 LGALS13Q9UHV8 139 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 DOLKQ9UPQ8 538 aa11.88□□□□□ -0.51
CLNS1A-204ENST00000525428 LRP5O75197 1615 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms