RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 HPSEQ9Y251 543 aa13.63□□□□□ -0.23
SMCO4-202ENST00000525141 TIMM13Q9Y5L4 95 aaPredicted RBP13.63□□□□□ -0.23
SMCO4-202ENST00000525141 HNRNPDLO14979 420 aaKnown RBP13.62□□□□□ -0.23
SMCO4-202ENST00000525141 SPTLC1O15269 473 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 OAZ2O95190 189 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 ATF2P15336 505 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 ABCD1P33897 745 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 CASP5P51878 434 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 ARPP19P56211 112 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 WNT7BP56706 349 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
SMCO4-202ENST00000525141 JADE1Q6IE81 842 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 CNNM4Q6P4Q7 775 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 RTL10Q7L3V2 364 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 GET4Q7L5D6 327 aaPredicted RBP13.62□□□□□ -0.23
SMCO4-202ENST00000525141 FGF13Q92913 245 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 FGF14Q92915 247 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 DHX58Q96C10 678 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 BORCS6Q96GS4 357 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
SMCO4-202ENST00000525141 TBC1D7Q9P0N9 293 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 WNT16Q9UBV4 365 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 NUB1Q9Y5A7 615 aa13.62□□□□□ -0.23
SMCO4-202ENST00000525141 ANK1P16157 1881 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 A0A1B0GVL5 298 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 FRMD3A2A2Y4 597 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 PIRO00625 290 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 TBCAO75347 108 aaKnown RBP13.61□□□□□ -0.23
SMCO4-202ENST00000525141 CFHP08603 1231 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 PFKFB1P16118 471 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 GAP43P17677 238 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 MCM4P33991 863 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 CLCN5P51795 746 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 KYAT1Q16773 422 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 SLC5A9Q2M3M2 681 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 CTXN3Q4LDR2 81 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 LIN9Q5TKA1 542 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
SMCO4-202ENST00000525141 RNF19BQ6ZMZ0 732 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 TCEAL8Q8IYN2 117 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 C7orf25Q9BPX7 421 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 PLA2G2FQ9BZM2 168 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 CRISPLD1Q9H336 500 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 SEL1LQ9UBV2 794 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
SMCO4-202ENST00000525141 POLIQ9UNA4 740 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 SCN1AP35498 2009 aa13.61□□□□□ -0.23
SMCO4-202ENST00000525141 ANO9A1A5B4 782 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 H7C4K7 107 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 XYLBO75191 536 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 MOSPD3O75425 235 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 NFICP08651 508 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 CCR2P41597 374 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 SYKP43405 635 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 LILRA4P59901 499 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 GPC5P78333 572 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 PRSS36Q5K4E3 855 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 C9orf57Q5W0N0 161 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 CD302Q8IX05 232 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 CEP57L1Q8IYX8 460 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 GLIS3Q8NEA6 775 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 GPR152Q8TDT2 470 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 TCEAL4Q96EI5 215 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 FAM212AQ96EL1 285 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 TRIM9Q9C026 710 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 AVENQ9NQS1 362 aaPredicted RBP13.6□□□□□ -0.23
SMCO4-202ENST00000525141 CEP72Q9P209 647 aa13.6□□□□□ -0.23
SMCO4-202ENST00000525141 AGO2Q9UKV8 859 aaKnown RBP13.6□□□□□ -0.23
SMCO4-202ENST00000525141 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
SMCO4-202ENST00000525141 H0Y858 1186 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 GALR2O43603 387 aaPredicted RBP13.59□□□□□ -0.23
SMCO4-202ENST00000525141 ACTN4O43707 911 aaKnown RBP13.59□□□□□ -0.23
SMCO4-202ENST00000525141 RHOP08100 348 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SRFP11831 508 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 PTPN2P17706 415 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 HOXD13P35453 343 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 MRE11P49959 708 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 NDUFA8P51970 172 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 PPP2R3AQ06190 1150 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 ADCY1Q08828 1119 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
SMCO4-202ENST00000525141 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 NPAS3Q8IXF0 933 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 CCDC65Q8IXS2 484 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 SIX5Q8N196 739 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 APPL2Q8NEU8 664 aa13.59□□□□□ -0.23
SMCO4-202ENST00000525141 FLCNQ8NFG4 579 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms