RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SRRM1Q8IYB3 904 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 LNX2Q8N448 690 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 AFAP1L2Q8N4X5 818 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 ZGPATQ8N5A5 531 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 SH2D3CQ8N5H7 860 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SLC9A6Q92581 669 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 CAVIN3Q969G5 261 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 RAX2Q96IS3 184 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 PAWRQ96IZ0 340 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 ALOXE3Q9BYJ1 711 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 GREM2Q9H772 168 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 IFT22Q9H7X7 185 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 UNKLQ9H9P5 680 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 IFT122Q9HBG6 1241 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 USP25Q9UHP3 1055 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 KCNE5Q9UJ90 142 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 ATP11BQ9Y2G3 1177 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 AATKQ6ZMQ8 1374 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 DHX29Q7Z478 1369 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 SCAF11Q99590 1463 aaKnown RBP2.43□□□□□ -2.02
CD44-212ENST00000524922 TIAM1Q13009 1591 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 SHPRHQ149N8 1683 aa2.43□□□□□ -2.02
CD44-212ENST00000524922 DISP2A7MBM2 1401 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ARHGAP5Q13017 1502 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 MAP3K1Q13233 1512 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ADGBQ8N7X0 1667 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ITSN2Q9NZM3 1697 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 UNC13BO14795 1591 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ARHGAP35Q9NRY4 1499 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 MYADML2A6NDP7 307 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 AKR1B10O60218 316 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ELFN1P0C7U0 828 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 POU3F3P20264 500 aaPredicted RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 ECHS1P30084 290 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 SLC6A4P31645 630 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 PTPN7P35236 360 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ATXN1P54253 815 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 CACNA2D1P54289 1103 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 ELLP55199 621 aaPredicted RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 MGAT2Q10469 447 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 MALLQ13021 153 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 MTM1Q13496 603 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 SART3Q15020 963 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 RRP12Q5JTH9 1297 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 FAM43AQ8N2R8 423 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.42□□□□□ -2.02
CD44-212ENST00000524922 TGFBRAP1Q8WUH2 860 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 CASKIN2Q8WXE0 1202 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 STON2Q8WXE9 905 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 LDAHQ9H6V9 325 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 RBM12Q9NTZ6 932 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 TESQ9UGI8 421 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 KCNG1Q9UIX4 513 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 TLK1Q9UKI8 766 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 SPHKAPQ2M3C7 1700 aa2.42□□□□□ -2.02
CD44-212ENST00000524922 COL16A1Q07092 1604 aaPredicted RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 GPATCH8Q9UKJ3 1502 aaKnown RBP2.42□□□□□ -2.02
CD44-212ENST00000524922 DIP2AQ14689 1571 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 RPRD2Q5VT52 1461 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 KAT6AQ92794 2004 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 KRTAP29-1A8MX34 341 aaPredicted RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 RAB11FIP3O75154 756 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 PROP1O75360 226 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 ULK1O75385 1050 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 IL2RBP14784 551 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 ITPKBP27987 946 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 VAV2P52735 878 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 GYS2P54840 703 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 RAP2BP61225 183 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 ERVK-21P61565 698 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 NOMO3P69849 1222 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 RBM6P78332 1123 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 CCT2P78371 535 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 HSD11B2P80365 405 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 SRSF2Q01130 221 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 NOMO1Q15155 1222 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 NOMO2Q5JPE7 1267 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 DACT2Q5SW24 774 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 TMPRSS9Q7Z410 1059 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 PQLC1Q8N2U9 271 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 AFAP1Q8N556 730 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 UBR7Q8N806 425 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 DCBLD1Q8N8Z6 715 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 AUTS2Q8WXX7 1259 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 FATE1Q969F0 183 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 NAF1Q96HR8 494 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 TTC1Q99614 292 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 AIFM2Q9BRQ8 373 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 QRSL1Q9H0R6 528 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 KLK15Q9H2R5 256 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 RNPEPQ9H4A4 650 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 GALNT9Q9HCQ5 603 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 ZNF277Q9NRM2 450 aaPredicted RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 KCTD5Q9NXV2 234 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 RNF181Q9P0P0 153 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 ARPP21Q9UBL0 812 aaPredicted RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 AJAP1Q9UKB5 411 aaPredicted RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 APOBEC2Q9Y235 224 aaKnown RBP2.41□□□□□ -2.02
CD44-212ENST00000524922 ACTL7AQ9Y615 435 aa2.41□□□□□ -2.02
CD44-212ENST00000524922 LAMC1P11047 1609 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms