RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	BMP5	P22003	454 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	ENPP1	P22413	925 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	PTPA	Q15257	358 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	C19orf54	Q5BKX5	351 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	METRNL	Q641Q3	311 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655		Q6ZVL8	140 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	KRT27	Q7Z3Y8	459 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	CBARP	Q8N350	705 aa	Predicted RBP	5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	DNAJC5G	Q8N7S2	189 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	STON2	Q8WXE9	905 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	RSAD2	Q8WXG1	361 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	RIN2	Q8WYP3	895 aa	Predicted RBP	5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	DDX17	Q92841	729 aa	Known RBP	5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	WDR11	Q9BZH6	1224 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	LDAH	Q9H6V9	325 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	MYO5C	Q9NQX4	1742 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	CTTNBP2	Q8WZ74	1663 aa		5.84	□□□□□ -1.47
SREK1-213	ENST00000523655	POLR2A	P24928	1970 aa	Known RBP	5.84	□□□□□ -1.48
SREK1-213	ENST00000523655	CHD4	Q14839	1912 aa		5.84	□□□□□ -1.48
SREK1-213	ENST00000523655	A2M	P01023	1474 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	TMEM191C	A6NGB0	347 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	AKR1B10	O60218	316 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	PRKD3	O94806	890 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	LAG3	P18627	525 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	PTPN7	P35236	360 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	SESN3	P58005	492 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	MORC3	Q14149	939 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	INAVA	Q3KP66	663 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	HSP90AB4P	Q58FF6	505 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	TOR2A	Q5JU69	321 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	METTL24	Q5JXM2	366 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	DNAJC10	Q8IXB1	793 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	TFAP2C	Q92754	450 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	SLC46A2	Q9BY10	475 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	SLC13A1	Q9BZW2	595 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	IP6K2	Q9UHH9	426 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	UNC13B	O14795	1591 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	NCOA2	Q15596	1464 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	ARHGAP23	Q9P227	1491 aa		5.83	□□□□□ -1.48
SREK1-213	ENST00000523655	PNPLA7	Q6ZV29	1317 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	CCDC189	A1A4V9	331 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	VSTM5	A8MXK1	200 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	HMGB1P1	B2RPK0	211 aa	Predicted RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	CHN2	P52757	468 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	RAP2B	P61225	183 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	SRSF2	Q01130	221 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	ZRSR2	Q15696	482 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	PTPN21	Q16825	1174 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	BMT2	Q1RMZ1	405 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	NBPF8	Q3BBV2	869 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	EFCAB12	Q6NXP0	572 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	TRMT2A	Q8IZ69	625 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	CPEB3	Q8NE35	698 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	PNISR	Q8TF01	805 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	ZNF480	Q8WV37	535 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	LMBR1	Q8WVP7	490 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	MYEOV	Q96EZ4	313 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	SERHL2	Q9H4I8	314 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	PRDM11	Q9NQV5	511 aa		5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	GNL3L	Q9NVN8	582 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	LUC7L2	Q9Y383	392 aa	Known RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	USP15	Q9Y4E8	981 aa	Predicted RBP	5.82	□□□□□ -1.48
SREK1-213	ENST00000523655	RPTOR	Q8N122	1335 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	CCDC78	A2IDD5	438 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	FZD9	O00144	591 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	ZEB1	P37275	1124 aa	Predicted RBP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	ERVK-21	P61565	698 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	MEF2A	Q02078	507 aa	Predicted RBP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	ABCB5	Q2M3G0	1257 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	C10orf62	Q5T681	223 aa	Predicted RBP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	TPH2	Q8IWU9	490 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	FUBP3	Q96I24	572 aa	Known RBP eCLIP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	ADAM2	Q99965	735 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	SYT17	Q9BSW7	474 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	SARG	Q9BW04	601 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	C14orf119	Q9NWQ9	140 aa		5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	PNMA8B	Q9ULN7	279 aa	Predicted RBP	5.81	□□□□□ -1.48
SREK1-213	ENST00000523655	KDM5A	P29375	1690 aa	Known RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	NKTR	P30414	1462 aa	Known RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	CAMSAP2	Q08AD1	1489 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	TMEM200C	A6NKL6	621 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	DRGX	A6NNA5	263 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	CXorf49	A8MYA2	514 aa	Predicted RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	RNASET2	O00584	256 aa	Known RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	ULK1	O75385	1050 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	FOS	P01100	380 aa	Predicted RBP	5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	PLA2G5	P39877	138 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	PPP3CA	Q08209	521 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	FAP	Q12884	760 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	TP53BP2	Q13625	1128 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	ADRM1	Q16186	407 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	MUM1	Q2TAK8	710 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	MST1L	Q2TV78	715 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	BEAN1	Q3B7T3	259 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	MINDY4	Q4G0A6	757 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	TMEM240	Q5SV17	173 aa		5.8	□□□□□ -1.48
SREK1-213	ENST00000523655	HECTD2	Q5U5R9	776 aa		5.8	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms